Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01985 ATGCTACTTGCAATAAAGAAGGATAAAGAGTGGGAAGTTCAAAGAAACGGCCACAAAGATACCACTAATGCTTATAAACTGTGGGCAAATAGGGTATCAAATGCTGTTGAAGAAGTACAGAAGCTGAAAGATAAATACGAAGGAAAAACGCTACCCTTTTGGCACATTCAAAAACGTTCACGTCTGAGTGAAGAGATGCAGAAGAAGTGCAACTTTGTTCTTGAACTTATGAGGGATGAATGTTTAAGAGATTTTCTAGTTGATAAACCACCTGAGCCTGTCTTAAAGGAGTTAAATGTTCCACAGATAAGTGGATATCCAACCCTTCAGGGTGCCTTGGAAGATATTTTGGGTTTGCTCAAAAATAATAAGATCAAAGTCATTGGAGTGTGTGGAACAAAAGGGGTGGGGAAAACGACAATATTGCGGAACCTGAACAACCATGAAGAGGTTGCTAAACTGTTTGAAATTGTCATCTTTATGAAAGTTACTTCTGATAATGATAAGCTTCAAGAGAAAATCGCTAATAGGTTGATGCTGGACATAGAAGCCAACAAGGAGCATAGTAGTGATGATGTTGCAAGAAGAATACACAAAGAGCTGGAGACAAAGAAGTATTTGTTGATTTTGGATGAGGTTGAAAATGTCATCAATTTGGAGCAGTTGGGAATTCCAAGTAATAATAATGGAAGTAAGGTGGTGATTGTCACTCGATTACCTATGGTTTATAAGTTGAGTAAGGTACAAAGGGTCATCAAAGTCATGGAGCTATCTCCTGAGGAAGCATGGAAGATGTTTAGAGACACTGTTCGTGCCTTCAATCCTAAGATTGATTCCCCTGACATTCAACCTATTGCCAAACTTGTATGCAAGAGGTGTTGTCGTCTTCCACTTCTTATTTACAAAATAGCAAATTCTTTCAAATTGAAAGAGTCTGCTCCTAGTTGGTGGGTGGGACTTGAAGATCTTAAACCATGGCCACAAATTCAAAATCAAGGTCTCCAAGAGTTGTACTCATGTCTGAAATTCTGTTACGATGAACTGAGAGATAAAAAGAAGCAAAAATGTTTTCTATACACTTCAATGTATCCTGCGGATTGCAAGGTTTACACTGATTATTTAGTGGAGTGTTGGACAGCACAAGGTTTACTTGGTGATATAAATAACAAAAGGTCATATCGAAGTGCACGCAATTGTGGTATTGACATATTGGAACATCTTGCTAATGTCTCTTTACTAGAGAAAGGAGAAGCCATGATATATGTCAACATGAATGATTGTATGAGACAACTTGCACTGCACATATGCTCTAAAGATCCTGAGTGTAGTTTTTATCTCCAAGATGGTGAAGAATATGAAAATCTCTCAAATTCAAGAGCTTGGCAGCAGGCTAGGTGGGTCTCTATGAGACAACTGATTGATTTACCAACAAGCCAAGATTGCAGCATGATTTTGACACTGTTGCTGCGAAAAAGTCCAAATCTAACTACAATACCACAAGCTTTTTTTGAGAACATGAATGGTCTACTTTTATTAGACTTGTATTGTAGCAAGATTACAAAGTTGCCACCATCTCTCTCAAAATTAACTGGTCTAAGGAGTTTATTTCTTAACAGTTGTGAGCTCTTGGAATCATTGTCACCTGAAATAAAATCACTTCAATTTCTAGAGGTTCTTGACATCCGAGATACCAAAGTAACTTTCCTACCTTTACAAATTAGATGTTTGACCAATCTAAGATGCTTGCGAATTCCATTCATTGCAAGTGATGCACAGAATGGAGCTCAAAATGTTGATGTGATTTCAAAGCTTCATAGGTTGGAAGAATTAACCATTCAAGTCATATCCTATGAACAATGGTGCAATGATGCTGAAAATGTACTGCAACATGTGGCTGATTTGGAAAATTTAACTCATCTCAGGTGTTGTTTTCCTTCCTCAATCATTCTTGGACAATTTCTTTCACGAAGTAAATCATGGAAGAATTGTGAGCAGCAAAATTCATTTAGATTCTTTGTGGGATGTCAAGACTCAAGAAGACCTCAAATACTTGAATCTTCTGAGTATAAGATTACTAGTTATTTGAGGTACTGCAATGGTGGACAGAAGGATGACTCAAAAATTACTGAGGTATTCTCGAAAGCTGATGCACTTGAATTAGTTTGCCATAAAGATATCAAAAAATTGTCAAATTTTGTTGGCATAGTGTGTTTGGAACGTATTCGTTGTCTTTCCATTGAAAGATGCAATAAAGTTTTAACAATTGTGTCAGCTGATACAAGTGGCAATATTATGAATGGAATCCAAACAGAAACAAGAGCCATCTTGCCAAATTTGGAGCAATTATATTTGGAAAATTTGCTCAATCTAAAATGTGCTTTTAGAGGTCCCTTGCACATTGGAACATTTTCCAAATTACAAATTTTATCATTGAAGAATTGTCCATCACTGAATGAAATTTTTAGCAATGGAGCAATTCAAAATTTTTGTGAACTTCAAAAGTTAAAAATTGAAGATTGTTCAAAAATTGAAGAACTTATCATACTAAGAGAAGACGTTGAAGGAGAAAAGGAGGTGCTTCCAAAACTAGAGATGCTTTTGTTGGTTAACTTAGCTGACTTAAAAATTATGTGCTCCAACCATACATTAGCTTGGTCCTCTCTAGAGCTGTTGAGGATTCATAATTGCCCAAAGTTGAAAACTTTACCGCTACACACTAAGAATGCAGCCAACTTGAAGACTATTAAAGGCCAACTTGAATGGTGGAATGAATTGGATTGGACAGACGATGTTGAAGTTTATCAGCGATTGCATCCCATCTTTGTCGCCTCAAATGAGTATTTTCCTTAG 2850 0.3667 MLLAIKKDKEWEVQRNGHKDTTNAYKLWANRVSNAVEEVQKLKDKYEGKTLPFWHIQKRSRLSEEMQKKCNFVLELMRDECLRDFLVDKPPEPVLKELNVPQISGYPTLQGALEDILGLLKNNKIKVIGVCGTKGVGKTTILRNLNNHEEVAKLFEIVIFMKVTSDNDKLQEKIANRLMLDIEANKEHSSDDVARRIHKELETKKYLLILDEVENVINLEQLGIPSNNNGSKVVIVTRLPMVYKLSKVQRVIKVMELSPEEAWKMFRDTVRAFNPKIDSPDIQPIAKLVCKRCCRLPLLIYKIANSFKLKESAPSWWVGLEDLKPWPQIQNQGLQELYSCLKFCYDELRDKKKQKCFLYTSMYPADCKVYTDYLVECWTAQGLLGDINNKRSYRSARNCGIDILEHLANVSLLEKGEAMIYVNMNDCMRQLALHICSKDPECSFYLQDGEEYENLSNSRAWQQARWVSMRQLIDLPTSQDCSMILTLLLRKSPNLTTIPQAFFENMNGLLLLDLYCSKITKLPPSLSKLTGLRSLFLNSCELLESLSPEIKSLQFLEVLDIRDTKVTFLPLQIRCLTNLRCLRIPFIASDAQNGAQNVDVISKLHRLEELTIQVISYEQWCNDAENVLQHVADLENLTHLRCCFPSSIILGQFLSRSKSWKNCEQQNSFRFFVGCQDSRRPQILESSEYKITSYLRYCNGGQKDDSKITEVFSKADALELVCHKDIKKLSNFVGIVCLERIRCLSIERCNKVLTIVSADTSGNIMNGIQTETRAILPNLEQLYLENLLNLKCAFRGPLHIGTFSKLQILSLKNCPSLNEIFSNGAIQNFCELQKLKIEDCSKIEELIILREDVEGEKEVLPKLEMLLLVNLADLKIMCSNHTLAWSSLELLRIHNCPKLKTLPLHTKNAANLKTIKGQLEWWNELDWTDDVEVYQRLHPIFVASNEYFP 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01985 949 PRINTS Disease resistance protein signature 801 817 - -
Cca09g01985 949 PRINTS Disease resistance protein signature 127 142 - -
Cca09g01985 949 PRINTS Disease resistance protein signature 293 307 - -
Cca09g01985 949 PRINTS Disease resistance protein signature 200 214 - -
Cca09g01985 949 CDD AAA 107 214 - -
Cca09g01985 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 359 IPR027417 -
Cca09g01985 949 Pfam NB-ARC domain 116 347 IPR002182 GO:0043531
Cca09g01985 949 Gene3D - 345 434 IPR036388 -
Cca09g01985 949 SUPERFAMILY L domain-like 466 906 - -
Cca09g01985 949 Pfam Leucine rich repeat 487 542 IPR001611 GO:0005515
Cca09g01985 949 Gene3D Ribonuclease Inhibitor 705 926 IPR032675 -
Cca09g01985 949 Gene3D Ribonuclease Inhibitor 457 670 IPR032675 -
Cca09g01985 949 Coils Coil 25 49 - -
Cca09g01985 949 Gene3D - 94 253 IPR027417 -
Cca09g01985 949 Gene3D - 256 344 IPR042197 -
Cca09g01985 949 PANTHER DISEASE RESISTANCE PROTEIN RP 19 840 IPR044974 GO:0006952
Cca09g01985 949 PANTHER - 19 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01985 Cca-Chr9 44842443 44845292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01985 125 517 WRKY Transcription Factor Family AT5G45050 21.065 7.66e-06 48.1