Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca09g01942 | ATGAAGTGGGGTGGAAGAAAGCcttcttcttcttcttcttcttctAGGCCTTCTTTCATATCTCATGTCTCTCCTTTTTCATGGCTGTCTAAGTTCAAGCAAATGAGGATCAACTCAGAGGCAAAACCAGGAACACTGAAGCAAAATTCAACTCCGTCTGATAGTTCGTCCCATTATGCTTATGGGAACAATAAAGGCAGGTTTTACGGAAGGGATGATGAGGCTTTCTGGAGACTCTCATTTGGTGAAGAGGGTAACGAGCATAATAAGAAAAGTGAACATGTTTTGAAACATGTGAAGTACAATTTGGATGCTGAACATGGCACTCCATCCTCAAGTTTTGGTGGAGTGAATGCTAGAAGACAAGGTGGAAAAGAAAGCACTCAGAAGTTGAAGCAGAAAGAAACTGGACTGAGAGAAGAAAGAAAGTTGCTGGATGAAGCAGCAAAGAGTGTTAAGGAGCTTGAGTCCTTAAGGAGGAGATATGAGAGAAAAGCACAAAGAGTTTTGCAGGAGCAGCTCTTGAAATTGGAAAGAGCAGAAGAGGAAGCTGAGTTTGCATCAAGTCCATTAGAAAATGATGTGATGCAATTTGAGTCACCAAGAACAATTTGCACACCAAGAAAGCATTTGTTTTCCTCTTCTGTGGATTCAAAGAGTTATGGCCTTGGAGGTCTCAGAGAAGCTCGTGTGTGTAGTCCCTTGTTGGGTTCTGAGTGGCATAATTTGAAGCAAACCGAGGAGTTGAAACTGAAAGCAAAGAGTAACAAACAAAGGCAATCACTTCATGTGAGCAGAGAAAACCAGAGGAGGAAACCAAAGCAGAACTCCAAGAGAGATTTCAGAGATTCAATGATTGAGATGATCACAGAGAAACAGATCAGCCAGCCAGATGAAATGGAAGATCTGTTAGCATGTTATCTGACTTTGAATTCTAGTGAGTACCATGATCTCATCATCCAAGTGTTCAAGCAGGTTTCACCCATTATAAGCCCCACATAA | 1002 | 0.4082 | MKWGGRKPSSSSSSSRPSFISHVSPFSWLSKFKQMRINSEAKPGTLKQNSTPSDSSSHYAYGNNKGRFYGRDDEAFWRLSFGEEGNEHNKKSEHVLKHVKYNLDAEHGTPSSSFGGVNARRQGGKESTQKLKQKETGLREERKLLDEAAKSVKELESLRRRYERKAQRVLQEQLLKLERAEEEAEFASSPLENDVMQFESPRTICTPRKHLFSSSVDSKSYGLGGLREARVCSPLLGSEWHNLKQTEELKLKAKSNKQRQSLHVSRENQRRKPKQNSKRDFRDSMIEMITEKQISQPDEMEDLLACYLTLNSSEYHDLIIQVFKQVSPIISPT | 333 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca09g01942 | 333 | Coils | Coil | 138 | 183 | - | - | |
Cca09g01942 | 333 | MobiDBLite | consensus disorder prediction | 125 | 139 | - | - | |
Cca09g01942 | 333 | TIGRFAM | A_thal_3678: uncharacterized plant-specific domain TIGR01568 | 276 | 326 | IPR006458 | - | |
Cca09g01942 | 333 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 278 | 326 | IPR038933 | GO:0045892 | |
Cca09g01942 | 333 | MobiDBLite | consensus disorder prediction | 39 | 64 | - | - | |
Cca09g01942 | 333 | PANTHER | TRANSCRIPTION REPRESSOR OFP4 | 278 | 326 | - | - | |
Cca09g01942 | 333 | PANTHER | TRANSCRIPTION REPRESSOR OFP4 | 9 | 279 | - | - | |
Cca09g01942 | 333 | MobiDBLite | consensus disorder prediction | 106 | 124 | - | - | |
Cca09g01942 | 333 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 9 | 279 | IPR038933 | GO:0045892 | |
Cca09g01942 | 333 | MobiDBLite | consensus disorder prediction | 106 | 139 | - | - | |
Cca09g01942 | 333 | ProSiteProfiles | OVATE domain profile. | 270 | 329 | IPR006458 | - | |
Cca09g01942 | 333 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cca09g01942 | 333 | MobiDBLite | consensus disorder prediction | 41 | 62 | - | - | |
Cca09g01942 | 333 | MobiDBLite | consensus disorder prediction | 252 | 283 | - | - | |
Cca09g01942 | 333 | Pfam | Transcriptional repressor, ovate | 278 | 326 | IPR006458 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca09g01942 | Cca-Chr9 | 44377913 | 44380014 | Dispersed/Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | OFP | Cca09g01942 | Ovate | 1.8e-19 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca09g01942 | - | - | var:108325898 | 478.018 |