Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01933 atgggaagtgaagaggtgaaggtgGTGAGCTTTTGGGCGAGTCCATTTGGTAAAAGGGTAGAGTGGGCTTTGAAACTCAAGGGTGTAGAATATGAGTACATTGAAGAAGATATCTTCAACAAGAGCAATCTCCTTCTCCAGCTGAACCCGGTTCACAAGAAGGTTCCGGTTCTTGTTCATGCCCACAAACCCATTGCTGAGTCACTTATCATCCTTGAATACATCGATGAAACATGGAAGCAGTATCCACTCTTGCCTCAACATCCTTATCAAAGAGCACTTGTTCGCTTCTGGACTAATTTCGTTGAGCAAAAGCTTTTTGATGCAGCATGGCTTGGTATGTGTTCGAGCGGGGATGAGCGGGAAAAGGGTGTGAAAGTAGCAAGAGAAAGATTCTTTGGTGGGGAGAATATTGGGTACCTAGATATTGCACTTGGATGGATTTCGTACTGGCTCCCTGTTTGGGAGGAAGTTGGATCAATGGAGATAATAGAGTCATTGAAATATCCAGCCACCACTGCATGGATCAACAATTTTCTGACCCACCCTCTCATCAAGGACACCTTTCCACCAAGAGACAACATGATTCTTTACTACAATCGCAGAAAGACACTTTTTTCAACTTTTAATGTTTAG 636 0.4167 MGSEEVKVVSFWASPFGKRVEWALKLKGVEYEYIEEDIFNKSNLLLQLNPVHKKVPVLVHAHKPIAESLIILEYIDETWKQYPLLPQHPYQRALVRFWTNFVEQKLFDAAWLGMCSSGDEREKGVKVARERFFGGENIGYLDIALGWISYWLPVWEEVGSMEIIESLKYPATTAWINNFLTHPLIKDTFPPRDNMILYYNRRKTLFSTFNV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01933 211 CDD GST_N_Tau 6 79 - -
Cca09g01933 211 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 205 IPR045073 -
Cca09g01933 211 PANTHER GLUTATHIONE S-TRANSFERASE 1 205 - -
Cca09g01933 211 SUPERFAMILY GST C-terminal domain-like 77 204 IPR036282 -
Cca09g01933 211 SFLD Glutathione Transferase (cytosolic) 2 204 IPR040079 -
Cca09g01933 211 SFLD Main.3: Omega- and Tau-like 2 204 IPR045073 -
Cca09g01933 211 Gene3D - 85 208 - -
Cca09g01933 211 SUPERFAMILY Thioredoxin-like 6 106 IPR036249 -
Cca09g01933 211 CDD GST_C_Tau 89 202 IPR045074 GO:0004364|GO:0006749
Cca09g01933 211 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Cca09g01933 211 Gene3D Glutaredoxin 1 84 - -
Cca09g01933 211 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01933 Cca-Chr9 44311330 44313346 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01933 2 202 Glutathione S-transferase Gene Family AT2G29420 45.070 7.55e-68 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01933 K00799 - gmx:547583 351.673