Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01932 ATGGAAAACGAAGATGTGAAGCTGTTCAACTTTTGGGTGAGTCCATTCGGCAAAAGGGTGGAGTGGGCCTTGAAACTCAAGGATGTAAAGTACGACTATGTCGAAGAAGATATCTTCAACAAGAGCAATCTCCTTCTCCAGTTGAACCCGGTTCACAAGAAGGTTCCGGTTCttgtgtacagctgcgtacagctgccaccacctttcgCTGTACCTAACATTGTTCACGCTCACAAACCCATCGCTGAGTCACTTATCATCGTTGAATATATCGATGAAACATGGAAGCATTATCCCTTGTTGCCTCGCCATCCTCATCACAAAGCTCATGCTCGCTTCTGGGCTACAACCGTTGAACAAAAGCTTGGGAAAGCTGGATGGGTAGCAATGTCTAGAAGTGGGGAAGAACAAGAAAAGGCTTTGAAGGAAGCGAATGATATAATAGAGAAAATAGAAGAAGAGATTAAGGGGAAGAAATATTTTGGAGGGGAGAATATTGGGTACCTTGACGTTGCACTTGGATGGATCGCTTACTTGGTTCCTGTGTGGGAGGAAGTTGGATCAATGAAGATGATAGAGCCATTGAAATTTCCAGGCATCACTTCATGGATGACCAATTTCCTGAGCCACCCTGTCATCAAGGACACCTTGCCCCCACGAGATAAGATGCTTCTTTACTATCACAATCGCAGAAACAATAGCCAAAACTTGCATAAGGTTTAG 723 0.4177 MENEDVKLFNFWVSPFGKRVEWALKLKDVKYDYVEEDIFNKSNLLLQLNPVHKKVPVLVYSCVQLPPPFAVPNIVHAHKPIAESLIIVEYIDETWKHYPLLPRHPHHKAHARFWATTVEQKLGKAGWVAMSRSGEEQEKALKEANDIIEKIEEEIKGKKYFGGENIGYLDVALGWIAYLVPVWEEVGSMKMIEPLKFPGITSWMTNFLSHPVIKDTLPPRDKMLLYYHNRRNNSQNLHKV 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01932 240 CDD GST_N_Tau 6 95 - -
Cca09g01932 240 Coils Coil 134 154 - -
Cca09g01932 240 Pfam Glutathione S-transferase, C-terminal domain 121 211 IPR004046 -
Cca09g01932 240 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 61 IPR045073 -
Cca09g01932 240 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 70 234 IPR045073 -
Cca09g01932 240 Pfam Glutathione S-transferase, N-terminal domain 5 93 IPR004045 -
Cca09g01932 240 Gene3D - 101 237 - -
Cca09g01932 240 SUPERFAMILY Thioredoxin-like 2 100 IPR036249 -
Cca09g01932 240 Gene3D Glutaredoxin 1 100 - -
Cca09g01932 240 CDD GST_C_Tau 105 226 IPR045074 GO:0004364|GO:0006749
Cca09g01932 240 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 99 IPR004045 -
Cca09g01932 240 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 104 225 IPR010987 -
Cca09g01932 240 PANTHER GLUTATHIONE S-TRANSFERASE 1 61 - -
Cca09g01932 240 PANTHER GLUTATHIONE S-TRANSFERASE 70 234 - -
Cca09g01932 240 SUPERFAMILY GST C-terminal domain-like 93 232 IPR036282 -
Cca09g01932 240 SFLD Main.3: Omega- and Tau-like 70 235 IPR045073 -
Cca09g01932 240 SFLD Glutathione Transferase (cytosolic) 70 235 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01932 Cca-Chr9 44301048 44309871 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01932 3 230 Glutathione S-transferase Gene Family AT2G29420 39.912 6.98e-61 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01932 K00799 - gmx:547585 366.311