Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01931 ATGGAAATAAGGAGAGAGATGATGGGAAGTGAAAAGGTGAAGTTAGTGAGTTCAGTGTTGAGTCCAGTTGGTCGCAGAGTTGAATGGGTGCTAAAGCTGAAGGGTGTTGATTACGAGTATGTGGAAGAAGATCTCTTCAACAAAAGCAACCTCCTTCTGGAACTGAACCCGGTTCACAAGAAGGTTCCGGTTCTTGTTCACCATCACAAACCGATTGCTGAGTCACTCATCATCCTTCAATACATCGACCAAACATGGAACCAATATCCACTGTTGCCCCAACATCCTTATCAAAGGGCGCTTGCACGCTTTTGGGGCACTCTTGCTGATAAGCTTGCAAAGACATCATGGGATGCAATGTGTGGCAGCGGGGATGAACAGGAGAAGACAGTGAAGGAAGCGAGAGAAGTAATGGATAAGTTAGAAGAAGAGATTAAGGGGAAGAGATTCTTTGGAGGGGACAGAATAGGGTACATTGACATTGCATTTGGATGGATCCCTTGCTGGCTTCCTGTTTGGGAAGAGGTTGGGTCAATGCAAATAGTAGAGCCTTTGAAACACACTGCCATATCTGCATGGATCAACAATTTTCTGAGCCACCCTGTTATCAGTCACAACTTGCCACCAAGAGACAAACTGCTTCTTTATTCCCAACGTCGCAAAAAGGACTTTTCCTCTACTCTTCGTCCTTAG 693 0.4531 MEIRREMMGSEKVKLVSSVLSPVGRRVEWVLKLKGVDYEYVEEDLFNKSNLLLELNPVHKKVPVLVHHHKPIAESLIILQYIDQTWNQYPLLPQHPYQRALARFWGTLADKLAKTSWDAMCGSGDEQEKTVKEAREVMDKLEEEIKGKRFFGGDRIGYIDIAFGWIPCWLPVWEEVGSMQIVEPLKHTAISAWINNFLSHPVISHNLPPRDKLLLYSQRRKKDFSSTLRP 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01931 230 SFLD Glutathione Transferase (cytosolic) 9 226 IPR040079 -
Cca09g01931 230 Pfam Glutathione S-transferase, C-terminal domain 126 201 IPR004046 -
Cca09g01931 230 SUPERFAMILY Thioredoxin-like 12 111 IPR036249 -
Cca09g01931 230 CDD GST_N_Tau 13 86 - -
Cca09g01931 230 Gene3D Glutaredoxin 7 91 - -
Cca09g01931 230 CDD GST_C_Tau 96 220 IPR045074 GO:0004364|GO:0006749
Cca09g01931 230 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 95 224 IPR010987 -
Cca09g01931 230 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 224 IPR045073 -
Cca09g01931 230 SUPERFAMILY GST C-terminal domain-like 84 222 IPR036282 -
Cca09g01931 230 Pfam Glutathione S-transferase, N-terminal domain 12 84 IPR004045 -
Cca09g01931 230 Coils Coil 124 144 - -
Cca09g01931 230 SFLD Main.3: Omega- and Tau-like 9 226 IPR045073 -
Cca09g01931 230 Gene3D - 92 227 - -
Cca09g01931 230 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 11 90 IPR004045 -
Cca09g01931 230 PANTHER GLUTATHIONE S-TRANSFERASE 7 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01931 Cca-Chr9 44295190 44297291 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01931 6 220 Glutathione S-transferase Gene Family AT2G29420 44.444 1.33e-62 193