Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01926 ATGGATAGTAAGTTCAGCAACAACCGCAAACCATCCTATACCATCAACGAACAAGAAGACACTGATGCATCTCAAGAAAACAATATTGCAGACTCCCCTCCCTCTTCCACTGTGCTCAACATCGATGGCTTAGTCACCTCCCCCACTTCTTCATCAAAGAGAAGGAGGGCAATACAGAAAAGGGTAGTGCAAATCCCAATCAAGGAGACAGAAGGGTGTAGGCTAAAAGGAGAAAGCAACACCCCACCCTCGGATTCATGGGCATGGAGAAAGTATGGGCAGAAACCCATCAAAGGTTCCCCTTATCCCAGAGGGTACTACAGGTGTAGCAGTTCGAAGGGGTGTCCGGCACGGAAACAAGTGGAAAGGAGCTGTGTGGACCCCACAATGTTAGTCGTCACTTACTCTTCCGACCACAACCATCCCTGGCCGCTTTCTAGGAACCATACAAGGCCCACAAAGAAGCCCgaaccagaaccagaaccagaaccagaaccagaaccagaGCCTGAACCGGTTCTGGACCCGGTCGAACCGGAGGAGAAGTTCGCGGATCTGGGAAGGGACGATTCCATGATCAGCACAGCGGATGAGATGGGGTGGTTTGGGGAGATGGAAACGACGTCGTCCACGGTTCTCGAAAGCCCTATAATGACCACGGGCTTTCATGCTGACGTGGCACTGTTGCCGATGAGGGAAGAGGACGAGTCGCTGTTCGCCGACCTAGGAGAGCTGCCGGAGTGCTCGGTGGTGTTCCGCCAGGGGATGCTGGCGGAGCGCCGGCGGTACACGGCTCCCTGGTGTGGGACCACAAGTTGA 819 0.5177 MDSKFSNNRKPSYTINEQEDTDASQENNIADSPPSSTVLNIDGLVTSPTSSSKRRRAIQKRVVQIPIKETEGCRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSCVDPTMLVVTYSSDHNHPWPLSRNHTRPTKKPEPEPEPEPEPEPEPEPVLDPVEPEEKFADLGRDDSMISTADEMGWFGEMETTSSTVLESPIMTTGFHADVALLPMREEDESLFADLGELPECSVVFRQGMLAERRRYTAPWCGTTS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01926 272 MobiDBLite consensus disorder prediction 136 190 - -
Cca09g01926 272 MobiDBLite consensus disorder prediction 1 53 - -
Cca09g01926 272 PANTHER WRKY TRANSCRIPTION FACTOR 65-RELATED 1 256 - -
Cca09g01926 272 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 256 IPR044810 GO:0003700
Cca09g01926 272 SUPERFAMILY WRKY DNA-binding domain 81 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca09g01926 272 SMART WRKY_cls 83 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca09g01926 272 MobiDBLite consensus disorder prediction 73 94 - -
Cca09g01926 272 ProSiteProfiles WRKY domain profile. 84 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca09g01926 272 MobiDBLite consensus disorder prediction 1 60 - -
Cca09g01926 272 Pfam WRKY DNA -binding domain 85 142 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca09g01926 272 MobiDBLite consensus disorder prediction 175 190 - -
Cca09g01926 272 Gene3D WRKY domain 72 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01926 Cca-Chr9 44231270 44233055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01926 20 254 WRKY Transcription Factor Family AT1G29280 54.321 1.13e-78 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Cca09g01926 WRKY 6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01926 - - gmx:100127392 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01926 09 44231270 44233055 Cca09g01926 09 44231270 44233055 ECH