Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01919 ATGAAGAATTGTGATGAATGGAAACCTTTCCTAGTTATGATAGCAATTGATATTTCTTTAACCATGGTGAACATTCTCCTCAAGAAAGTCCTCCAAGAGGGAATGAACCATTTGGTTTTTATCACATATCGTTTGTCAGTTTCTACTATATTTTTGGCCCCCATCGGCTACTTTAAGGAAAGAAATGGAAGACCACGACTCACATTTCAAATTTTATGCTACCTTTTCTTCAGTGCAATTATTGGGGCATCCATCACACAATACTTCTTCCTTCTGGGGATCCAATACACCTCGGCTACCTTTGCTTGTGCCTTTGTTAACATGGTGCCGGTGATCACATTCATTATGGCGTTACCATTTGGATTAGAAACTGTGAACATCAAATGCAAAGGTGGGAAAGCGAAGATTCTTGGAACATTTGTGTGCATAGGAGGGGCATTGTTGTTGACACTTTACAAAGGGAAGCCCTTGTTTGATGACTCTCACTATCAATCTGCAGTTCCTCCAGTGGCCATGAGATCATCTGCGATGGACCAAGCCTCTAGTAATAGAATAACACAAAAATGGACCATTGGTGTAATAGCTTTGATTATGGGAACCCTCTTTTGGTCTTTTTGGTTTATTTTACAGTCAAAGATAGGGAAGAGGTACCCATGCCAGTATTCTAGCACTACCATCATGACCTTCTTTGGAGCCATGCAAGCAGCTATTCTTGCTTTCTCCACTGGCAGCAACTTGTCATCGTGGATTGTCAAGGATAAGATGCAAATAATCACAGTTCTTTATTCTGGGATAGTTGGATCAAGTGTGTGCTACGTGGGGATGTCATGGTGCGTGAAGAAGAGGGGTCCCGTCTTCACTGCAGCATTCAGCCCTCTAGTTCAGATAATGTCAGGCATGATTGACATCCCAATCTTGCATGAGCAGCTTCATCTTGGAAGTGTGGTGGGATCCATGTTGGTGATGATCGGGTTGTACATTCTTCTGTGGGGTAAGAGCAAGCAGATGGTACAGAATGGCGCCACTAAGTTCGCCCAAGAAGTTGAGGAAACGAAGGAACAAGAACCGCAAGTATAG 1077 0.429 MKNCDEWKPFLVMIAIDISLTMVNILLKKVLQEGMNHLVFITYRLSVSTIFLAPIGYFKERNGRPRLTFQILCYLFFSAIIGASITQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLETVNIKCKGGKAKILGTFVCIGGALLLTLYKGKPLFDDSHYQSAVPPVAMRSSAMDQASSNRITQKWTIGVIALIMGTLFWSFWFILQSKIGKRYPCQYSSTTIMTFFGAMQAAILAFSTGSNLSSWIVKDKMQIITVLYSGIVGSSVCYVGMSWCVKKRGPVFTAAFSPLVQIMSGMIDIPILHEQLHLGSVVGSMLVMIGLYILLWGKSKQMVQNGATKFAQEVEETKEQEPQV 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01919 358 PANTHER WAT1-RELATED PROTEIN 9 353 - -
Cca09g01919 358 PANTHER WAT1-RELATED PROTEIN 9 353 IPR030184 GO:0016021|GO:0022857
Cca09g01919 358 Pfam EamA-like transporter family 24 150 IPR000620 GO:0016020|GO:0016021
Cca09g01919 358 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020|GO:0016021
Cca09g01919 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 334 - -
Cca09g01919 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01919 Cca-Chr9 44117539 44120581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01919 7 263 Nodulin-like Gene Family AT3G30340 50.584 3.70e-89 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01919 - - gmx:100791663 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01919 09 44117539 44120581 Cca08g02341 08 57286796 57301333 PCT