Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01907 ATGGACCATCCCTGGTTCAAGAAGGACTTCAAGCAGATTAAATTCTACGTTGAGGATGACAGGGTTTGTAGTTTTGATGATAAGCTTCAGCTCCAGCTTCatcatgatgatcatgctgatgatgatTTCGCCACGTCTGATTCTGAGGTTGAGGTTAGAAGGAGGAATACTACCAATGCTTCGTTGCCGAGGCCTGCCAGTTTGAATGCGTTTGACATCATATCGTTTTCCCAAGGCTTTGACCTCTCTGGCTTGTTTGAGGAAAAAGGCGATGAGGCCAGGGTCAGCTTGGAGGGGTGTCGGGAAGGTGTGAAGGGGCCTTTGACCATTGCTGCTGAAATTTTTGAGCTGACACCTTCCTTGGTGGTGGTGGAGGTCAAGAAAAAGGGAGGGGATAAGGCCGAGTATGACAAGTTTTGCAACTCTGAGTTGAGGCCTGCTTTGGAGAATTTGATGGTGGAGGAAACAGCTTCTTCTTCAGGCCAATCTACGCACTCTGAATCTAAATCTAAACCCCCACAACGAGTTCTTTCTGAATCTGCCCTTGACAAACATTTAGATGTAAAGGGAAATGAAAGCGCCTAA 585 0.4496 MDHPWFKKDFKQIKFYVEDDRVCSFDDKLQLQLHHDDHADDDFATSDSEVEVRRRNTTNASLPRPASLNAFDIISFSQGFDLSGLFEEKGDEARVSLEGCREGVKGPLTIAAEIFELTPSLVVVEVKKKGGDKAEYDKFCNSELRPALENLMVEETASSSGQSTHSESKSKPPQRVLSESALDKHLDVKGNESA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01907 194 MobiDBLite consensus disorder prediction 153 194 - -
Cca09g01907 194 PANTHER - 1 94 - -
Cca09g01907 194 CDD CIPK_C 69 148 - -
Cca09g01907 194 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 18 95 153 - -
Cca09g01907 194 MobiDBLite consensus disorder prediction 178 194 - -
Cca09g01907 194 PANTHER - 95 153 - -
Cca09g01907 194 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 18 1 94 - -
Cca09g01907 194 MobiDBLite consensus disorder prediction 153 175 - -
Cca09g01907 194 ProSiteProfiles NAF domain profile. 63 87 IPR018451 GO:0007165
Cca09g01907 194 Pfam NAF domain 65 94 IPR004041 GO:0007165
Cca09g01907 194 Gene3D Kinase associated domain 1, KA1 65 92 - -
Cca09g01907 194 Gene3D Kinase associated domain 1, KA1 93 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01907 Cca-Chr9 43959894 43961256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01907 1 158 CBL-interacting serine-threonine protein kinases AT4G18700 52.910 4.23e-57 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01907 - - gmx:100807567 251.521