Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01906 ATGGCAGAGGCATCTCCAAAGGCGAACCTCCTCCTGGGGCGGTTCGAGCTCGGTAAGCTCCTGGGCCACGGAACCTTCGCGAAGGTCCACCACGCGCGCAACACCAAAACCGGGGAAGGCGTGGCCATCAAAATCATAAACAAGGAGAAGATCCTCAAAGGCGGTTTAGTGTCCCACATAAAGCGCGAGATCTCGATCCTCCGCCGCGTGCGCCACCCCAACATCGTCCAGCTCTTCGAAGTGATGGCCACCAAAACCAAGATCTACTTCGTGATGGAGTTCGTCCGCGGCGGCGAGCTCTTCAACAAGGTCGCCAAAGGGAGGCTCAAGGAACAAGCCGCCAGAACCTACTTCCAACAGTTAATCTCCGCCGTCCAGTTTTGCCACGCGCGAGGGGTCTTCCACAGGGACATCAAGCCCGAGAATTTACTCCTGGACGAAAACGGAAACCTGAAAGTCTCCGACTTCGGACTGAGCGCCGTCTCGGACCAGATAAGGCAGGACGGGCTCTTCCACACCTTTTGCGGCACTCCTGCTTACGTGGCACCGGAGGTTTTGGGTCGCAAGGGCTACGACGGTGCCAAGGTGGTTCTCTTCTGA 600 0.5767 MAEASPKANLLLGRFELGKLLGHGTFAKVHHARNTKTGEGVAIKIINKEKILKGGLVSHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEFVRGGELFNKVAKGRLKEQAARTYFQQLISAVQFCHARGVFHRDIKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLGRKGYDGAKVVLF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01906 199 ProSiteProfiles Protein kinase domain profile. 15 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01906 199 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Cca09g01906 199 Pfam Protein kinase domain 16 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01906 199 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 4 197 - -
Cca09g01906 199 SUPERFAMILY Protein kinase-like (PK-like) 11 193 IPR011009 -
Cca09g01906 199 SMART serkin_6 15 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01906 199 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Cca09g01906 199 PANTHER - 4 197 - -
Cca09g01906 199 Gene3D Transferase(Phosphotransferase) domain 1 6 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01906 Cca-Chr9 43959105 43959826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01906 4 199 CBL-interacting serine-threonine protein kinases AT4G18700 85.204 1.40e-122 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Cca09g01906 Pkinase 9.5e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01906 - - gmx:100807567 360.533