Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01899 ATGGCCTCCACCAAGGAACGCGAAAACTTCGTCTACGTCGCCAAGCTCGCCGAACAAGCCGAACGCTATGAAGAAATGGTGGATGCAATGAAGAATGTGGCGAGGCTAAACGTGGAATTGACGGTTGAGGAGCGGAACCTTCTGTCGGTTGGGTACAAGAACGTGGTGGGTGCTCGTAGGGCATCGTGGAGGATTCTTTCCTCGATTGAGCAGAAGGAAGAGTCTAAAGGGAACGATGTGAGTGTGAAGCGGATAAAGGAGTATAGGCAGAAGGTGGAGTCTGAGTTGACCAATATCTGCAGTGATATCATGACTGTTATTGATCAACACCTTATTCCCTCTAGCACTGCTGGTGAACCTAGTGTCTTTTTCTACAAAATGAAGGGGGACTATTACCGGTATCTCGCAGAGTTCAAGTCCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAGGCGTATCAGGCGGCTTCCACTACTGCAGAGGCTGAGTTACCTCCCACGCATCCCATCCGATTGGGTCTGGCTTTGAACTTCTCTGTCTTCTATTATGAAATTTTAAACTCTCCTGAAAGGGCGTGTCACCTTGCTAAGCAGGCATTTGATGAAGCAATCTCTGAGTTGGATACTTTGAGTGAGGAGTCTTACAAAGACAGCACACTAATCATGCAGCTTCTGAGGGACAACCTCACTTTGTGGACTTCTGACATCCCTGAAGATGGAGCAGAGGAACAAAAGGTGGATTCTGCCCGAGCTGCTGGAGGTGAAGAATGA 777 0.4839 MASTKERENFVYVAKLAEQAERYEEMVDAMKNVARLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEESKGNDVSVKRIKEYRQKVESELTNICSDIMTVIDQHLIPSSTAGEPSVFFYKMKGDYYRYLAEFKSGDERKEAADHSMKAYQAASTTAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGAEEQKVDSARAAGGEE 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01899 258 SMART 1433_4 7 248 IPR023410 -
Cca09g01899 258 Coils Coil 13 33 - -
Cca09g01899 258 MobiDBLite consensus disorder prediction 240 258 - -
Cca09g01899 258 Gene3D - 1 250 IPR036815 -
Cca09g01899 258 PIRSF 14-3-3 1 247 IPR000308 -
Cca09g01899 258 PANTHER 14-3-3-LIKE PROTEIN D ISOFORM X1 4 251 - -
Cca09g01899 258 PANTHER 14-3-3 PROTEIN 4 251 IPR000308 -
Cca09g01899 258 MobiDBLite consensus disorder prediction 238 258 - -
Cca09g01899 258 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Cca09g01899 258 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Cca09g01899 258 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Cca09g01899 258 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Cca09g01899 258 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Cca09g01899 258 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Cca09g01899 258 Pfam 14-3-3 protein 14 235 IPR023410 -
Cca09g01899 258 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Cca09g01899 258 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Cca09g01899 258 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01899 Cca-Chr9 43811979 43816308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01899 1 258 14-3-3 family AT2G42590 77.395 3.14e-153 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01899 K06630 - gmx:100807980 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01899 09 43811979 43816308 Cca09g01899 09 43811979 43816308 ECH