Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca09g01863 | ATGCGAACTTCATGGGCAGATTTGGCTGCAAATTCTGCAGCTGAAAATGCAGGTACTTGGTCTTCTGCTAACAATGTGGGAACTGGTAGTACTGTAGCTCCTTCGCGGCCTGTTTATGTTCCTCCCCATCTGAGGAATCGCCAGCCATCAGCAGAATCCCCTGCTCCAACATATAGTGACCCTTCttcaggttctgctggctctagttctggtgctggtAATTCTGGATCCCGTTGGCCTGTACCCAGAAATGATTATCGGTCTGGGTTTGGTGGTGGTGGACGAGCAGGTGGATGGGGAAACAAAAGTAGTGGCTGGGATCGTGGCCGGGAGCGGGAAGTCAATCCTTTTGGAGACGAGGATACTGCTGAAGAAGGGGCATCTAGTGAGCAGGAGAATACAGGAATAAATTTTGATGCCTATGAAGATATTCCAGTGGAGACCAGCGGTGAAAATGTGCCCCCACCTGTGAATACATTTGCAGAGATTGACTTGGGTGAAGCACTTAATCAGAATATAAGAAGGTGCAAATACGTGAAGCCAACTCCTGTTCAGCGGCATACCATTCCAATTTCCCTCGCTGGACGTGATTTGATGGCTTGTGCGCAGACTGGTTCTGGAAAGACAGCTGCATTCTGTTTCCCGATTATCAGTGGAATTATGAGGGGCCAACCTGCGCAGAGGCCACCTCGTGGGGTGCGTACAGCACATCCGCTTGCGCTTGTTCTTTCTCCAACTAGGGAACTATCAATGCAAATACATGAAGAGGCTAGAAAGTTTTCATACCAAACTGGGGTTAGGGTGGTTGTTGCTTATGGTGGAGCACCGATAAATCAGCAGGCCCTTCCCACTCTGGTGTAG | 861 | 0.475 | MRTSWADLAANSAAENAGTWSSANNVGTGSTVAPSRPVYVPPHLRNRQPSAESPAPTYSDPSSGSAGSSSGAGNSGSRWPVPRNDYRSGFGGGGRAGGWGNKSSGWDRGREREVNPFGDEDTAEEGASSEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHTIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGQPAQRPPRGVRTAHPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQALPTLV | 286 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca09g01863 | 286 | Gene3D | - | 114 | 283 | IPR027417 | - | |
Cca09g01863 | 286 | MobiDBLite | consensus disorder prediction | 105 | 119 | - | - | |
Cca09g01863 | 286 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 189 | 286 | IPR014001 | - | |
Cca09g01863 | 286 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 48 | 280 | - | - | |
Cca09g01863 | 286 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 52B-RELATED | 48 | 280 | - | - | |
Cca09g01863 | 286 | MobiDBLite | consensus disorder prediction | 50 | 77 | - | - | |
Cca09g01863 | 286 | Pfam | DEAD/DEAH box helicase | 182 | 280 | IPR011545 | GO:0003676|GO:0005524 | |
Cca09g01863 | 286 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 140 | 281 | IPR027417 | - | |
Cca09g01863 | 286 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Cca09g01863 | 286 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 158 | 186 | IPR014014 | GO:0003724 | |
Cca09g01863 | 286 | MobiDBLite | consensus disorder prediction | 1 | 135 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca09g01863 | Cca-Chr9 | 43445631 | 43446696 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca09g01863 | 147 | 279 | Eukaryotic Initiation Factors Gene Family | AT1G72730 | 30.075 | 8.80e-10 | 57.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca09g01863 | K11594 | - | ccaj:109791229 | 532.717 |