Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01849 ATGAATATAAGTGTAAATGGGTCTTTATTATTGTCAATTGAAAGAATCAATCATGTGAAACTTAACATCTGCATTGTTGCTCCCCCCAACATTGTTTCGGATGGCTTATGGGGTGGCCATCTTAATGGAAGGACTCCAATGAAGTCTTCACTACCAGTGTTTGAGTTGCAAGTTCTTATGATTTTTGCTATCACCCAAATCTGGCATTTCTTCTTAAAGCGCTTTGACTTCCCTCAATTCATTCCACAAATGATAGCTGGCCTGATTCTAGGTCCTGCTATTCGGGTAGACATGTTGGACAAATACAAAAAGATGTTGTTTCCATATCCAAGTCAGGACACACTTGCATCTATAACATCAATTGGTTATGCACTTTTCATCTTCACAAGTGGTGTGCAAATGGATTTGAGCATGATAACCAGGACAGGACACAGGGCATGGACCATTGCCATCCTTGGAATGACTGTGCCATTGCTAATTTGTATTCCAATCATAACCACCATCCATTTTGAGGATTTGCAAAATCAAATTGGAATTCCTCTTTATAATGTTTCTCCTATAGTGCTATCAGAAGTTGTTATTTCATTTGCAGTGGTTGCTTCCCTCCTCAGTGAACTTAAAATCCTTAACTCTGAACTTGGCAGGTTAGCATTATCCTCGGTGTTGGTAAGTGACATATTGAGCAAAACCATTTCATGTGTTAACAATGCCTTTCTGGATAAAGAAGGACATCATAATATTTTAGTACTCTTGATATCATTGGTTGCCTTTGGCACCTTTATTCCACTAATTTTTCGGCCAGCAATGTTTTGGATCATCAAACATACTCCAGAAGGAAGGCCTGTGGATGATGGCTATGTCTATCTTATCATCACAATGGTCTTTGCATTAGGTTGGATTGCAGTTAAAATAAATCAAGAGTTCATCCTAGGAGCTTTTATTTTGGGGTTGGCTGTGCCAGAAGGACCTCCATTAGGATCTTCATTGGTCAAGAAGCTTCAGTTCTTTGGTAACAGTTTATTGTTGCCAATATTTGTGACTTGTGGTGTGATGAAGGCAGATTTTTCCTTGCACCACTCATCAAAAGCAGTTGTAGTCATTGGTATCATCATTCTTGTCACTCATCTCATCAAACTAATAGCATGCATTATACCTGCCCTCTTTTGCAAGATTCCCTTGAAAGATGCCTTGGCTCTAGCCCTCATTTTGAACGTTAAAGGCGTAGTGGATGTTGGCGCCTACGGTCTCTTATATGATGATGGGGTTATTAGTGGCCATAATTATGGAATCATGATAATCAGCATAATGATCACAGCATGCATAGTGAAATGGTCTGTGAAACTATTGTATGATCCATCAAGAAAATATGCTGGCTATCAGAAAAGGAACGTCATGAGTTTAAAATCAGACTCAGAGCTGAGAATACTTGCTTGCGTTCATAAACCATACCATATAACTGCTACAATAGATGTTCTTGATCTTTGTTGTCCAACAACAGAAAAACCCATCATTGTGGATGCATTGCATCTGATCGAGCTAATTGGCAGGACCTCTCCCATTTTCATTTCCCATCGCATTCAAAGAACGATTTCATCTGGTTCCCACCAGTCTTATTCAGATAATGTCATTCTTGCTTTTGATCTCTACGAGCATGACAATATTGGTGCAGTAACTGCACACGCTTACACAGCCATATCTCCACCCACCCTCATGCATGAAGATGTTTGCCAACTTGCATTGGACAAAGTAGCATCCATTATAATTCTTCCCTTCCATCGAAGATGGTCTATTGATGGTGGCATTGAATCTGATGACAAGAACATAAGGGCCTTAAATTGTAAGGTCCTAGATATAGCTCCATGCTCAGTTGGAATCCTCTTGAGCCGTTCTTCCATCCAAAGGGACTCATTCATTCAGGTAGCAATGATTTATTTGGGTGGAAAAGATGATAGAGAGGCTTTGAGCATAGCCAAACGAACAACGAGGAATTCGAGGGTGAAGTTGGTTGTGTACCACCTTGCTGCTAAGGAACACACACCAAACATAGATTATCTACTAGATCATGAGGCACTAAAAGATGTTAAGAAACCCAATCCTGGCACGGAAAATGTGAGTTATCACAAAGTTATAGTAGATGGTGGAGCAGAAACATCTGCTGTTCTTCGTCATATAGTAGATGAATATGACTTCTTCATAGTTGGGAGAAGACATGAGATAGAGTCAACTCAAACAGATGGCCTCGCAGTTTGGAGTGAATTTTCAGAGTTAGGTACCATTGGTGATTTGCTTGCTTCATCAGATTTTGGGAGCAGAGCGGGTGTTTTGGTGGTGCAGCAACAAGTGAAAGACACATAG 2355 0.4017 MNISVNGSLLLSIERINHVKLNICIVAPPNIVSDGLWGGHLNGRTPMKSSLPVFELQVLMIFAITQIWHFFLKRFDFPQFIPQMIAGLILGPAIRVDMLDKYKKMLFPYPSQDTLASITSIGYALFIFTSGVQMDLSMITRTGHRAWTIAILGMTVPLLICIPIITTIHFEDLQNQIGIPLYNVSPIVLSEVVISFAVVASLLSELKILNSELGRLALSSVLVSDILSKTISCVNNAFLDKEGHHNILVLLISLVAFGTFIPLIFRPAMFWIIKHTPEGRPVDDGYVYLIITMVFALGWIAVKINQEFILGAFILGLAVPEGPPLGSSLVKKLQFFGNSLLLPIFVTCGVMKADFSLHHSSKAVVVIGIIILVTHLIKLIACIIPALFCKIPLKDALALALILNVKGVVDVGAYGLLYDDGVISGHNYGIMIISIMITACIVKWSVKLLYDPSRKYAGYQKRNVMSLKSDSELRILACVHKPYHITATIDVLDLCCPTTEKPIIVDALHLIELIGRTSPIFISHRIQRTISSGSHQSYSDNVILAFDLYEHDNIGAVTAHAYTAISPPTLMHEDVCQLALDKVASIIILPFHRRWSIDGGIESDDKNIRALNCKVLDIAPCSVGILLSRSSIQRDSFIQVAMIYLGGKDDREALSIAKRTTRNSRVKLVVYHLAAKEHTPNIDYLLDHEALKDVKKPNPGTENVSYHKVIVDGGAETSAVLRHIVDEYDFFIVGRRHEIESTQTDGLAVWSEFSELGTIGDLLASSDFGSRAGVLVVQQQVKDT 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01849 784 Gene3D - 54 457 IPR038770 -
Cca09g01849 784 PANTHER EXCHANGER, PUTATIVE-RELATED 16 783 - -
Cca09g01849 784 PANTHER CATION/H + ANTIPORTER 16 783 - -
Cca09g01849 784 Pfam Sodium/hydrogen exchanger family 59 441 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01849 Cca-Chr9 43258546 43262646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01849 23 777 Antiporter Super Family AT3G44900 38.107 1.49e-173 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01849 - - gmx:100797995 1155.2