Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01839 ATGGACTTTTTTATTCCCTCCTCTCTTCTTTTCATCATTTTCTTCATTTTCTCATTGTTGAACACTCTTAATGGTTCAAACTCCAAGTCCCTCAAAATCCTACCACCGGGACCATGGAAACTGCCTCTTCTAGGCAATATTCACCAATTTGTAGGGCCACTTCGCCACCAAACTCTGAGAAACTTAGCTAACCAACATGGTCCCTTGATGCTCCTACAACTAGGTGAAAAGCCACACATTATAGTCTCTTCAGCAGACATTGCCGAAAAAGTTATGAAAACTCATGATGTCATCTTTGCTAACAGGCCTCATATTCTTGCTTCCAAATTCTTTCTCTATGAGAACAGTGATATAGCTTTCTCTTCCTATGGAAAAACTTGGAGGCAACTGAAGAAAATATGCATTTCACAGCTGCTAAATGCAAAGCACGTTCAATCATTGAGGCACATAAGAGAAGATGAGGTGTCAAAACTAGTTGAAAACATTCATGCAAATGAAGGATCAGTTATCAATCTTAGCAGGGAAATTGAGATCATGACAAATGCTATAATTGTTAAGGCAGTGAATGGTAAAAGGTGTGAGGACCAAGCAACTTTGCTATCAACGATGGAGAAAATGTTAGAGCTGTTGGGAGGTTTCTCGATCGCTGATTTCTACCCTTCAATCAAAGTGCTTCCTTTGCTTACAGGAATGAAAAATAAACTTGAAAGGGCACAGAGAGAAAATGATAAGATCCTAGAGAATATGGTTAAGGATCACATGGAAAATAATAAGAACAGCAAGAATGAGGATTTTATTGATATTCTTCTCAAAACTCAGAAGAAAGATGACTTGGAAATTCCATTGACTCACAACAATATCAAAGCAATTATTTGGGACATGTTTGTTGGGGGAACTGCTGCACCAACAGCAGTGGCAGTATGGGCAATGTCAGAACTGATGAAAAACCCGAACGTGATGGAGAAGACACAAGCCGAGGTAAGAAACGTTTTTAATGTAAAACACTACGTAGATGAAACCGACCTTGGACAGTGCGAATACTTAAAATCAGTGATAAAAGAAACCATGAGGCTACACCCTCCTGAAGCACTTCTAGTCCCAAGAGAAAACCGTGAGTCATGTGCCATCAATGGATTCGAAATCCCCGCAAAGAGCAAAGTCATTATCAATGCATGGGCCATTGGGAGGGATCCTAAGTATTGGCACCATGCAGAGAGGTTTTCACCTGAGAGATTCATTGGTAAAAGTTTTGATTTCAGTGGCACAAGTTTTGAGTACATACCCTTTGGTGCTGGACGTAGAATATGTCCAGGGGCTACATTTTCCGTGACCATCATCATGCTTTTACTGGCCAATTTGCTTTATCATTTTGATTGGAAAATGCCGAATGGGACAAAACACCATGAGCTGGACATGTCTGAGTCTTTTGGCCTCACAGTTAAGAAAGCTTCTGATCTTTGCTTGGTTCCCACTCCTTATCAACTCTGTCCGCACATGTGGTAG 1503 0.4059 MDFFIPSSLLFIIFFIFSLLNTLNGSNSKSLKILPPGPWKLPLLGNIHQFVGPLRHQTLRNLANQHGPLMLLQLGEKPHIIVSSADIAEKVMKTHDVIFANRPHILASKFFLYENSDIAFSSYGKTWRQLKKICISQLLNAKHVQSLRHIREDEVSKLVENIHANEGSVINLSREIEIMTNAIIVKAVNGKRCEDQATLLSTMEKMLELLGGFSIADFYPSIKVLPLLTGMKNKLERAQRENDKILENMVKDHMENNKNSKNEDFIDILLKTQKKDDLEIPLTHNNIKAIIWDMFVGGTAAPTAVAVWAMSELMKNPNVMEKTQAEVRNVFNVKHYVDETDLGQCEYLKSVIKETMRLHPPEALLVPRENRESCAINGFEIPAKSKVIINAWAIGRDPKYWHHAERFSPERFIGKSFDFSGTSFEYIPFGAGRRICPGATFSVTIIMLLLANLLYHFDWKMPNGTKHHELDMSESFGLTVKKASDLCLVPTPYQLCPHMW 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01839 500 Coils Coil 228 248 - -
Cca09g01839 500 Pfam Cytochrome P450 35 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01839 500 SUPERFAMILY Cytochrome P450 35 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01839 500 PANTHER CYTOCHROME P450 71D10 7 493 - -
Cca09g01839 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Cca09g01839 500 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01839 500 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01839 500 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01839 500 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01839 500 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01839 500 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01839 500 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01839 500 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01839 500 Gene3D Cytochrome P450 33 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01839 500 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01839 500 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01839 500 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01839 500 PANTHER CYTOCHROME P450 71B11-RELATED 7 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01839 Cca-Chr9 43128094 43133682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01839 9 493 Cytochrome P450 AT3G26300 40.121 7.86e-130 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01839 - K23806 gmx:100779120 766.918