Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01819 ATGGATACTAATTCAAGAAACTGGAGATTGGCAAGAAAGGCCCAATTGCTTGTTGCTTCTGCTCTTCTTTTGCTGCAAAACTATCTGGTCATCTCTTTAGAGGCAAGCTCTGTGCACATTGTATACATGGGAGAGAAGATATATCAAAATCCACAAACTACTAAAAAGTATCACCACAAAATGTTATCTTCACTCCTAGGAAGCAAAGAAGCTGCAAAAAATTCAATTCTTTACAGCTACAAGCATGGTTTTTCAGGGTTTGCTGCAAGATTGACAAAACGTCAAGCAGAAGCAATAGCAAAGTTTCCTGGGGTGGTTTCTGTCATTCCAAATGGCATTCACAAACTCCatacaaccagaagctgggacttcatggggatccatcattccacatcaaaaactgctttctcagatagcaacttaggtgaaggaaccatcataggtgtcatagacacagGCATTTGGCCAGAGTCACCAAGTTTCAACGATGAAGCAATGGCACAAGTTCCATCAAGGTGGAAAGGTGTTTGTCAAGAGGGAGAGCACTTCAACTCCACCAATTGCAACAAGAAGATAATAGGTGCAAGATGGTTCTTGAAAGGAATAACCAATCAGACCAAGAAACTTCTCCAAGGAAACAACACCAATGAATATCTCTCGGCAAGAGATGGCATTGGCCATGGCACTCACACAGCCTCCACAGCAGCTGGTTACTTTGTAGGAAATGCAAATTATAGAGGACTTGCTTCTGGTTTAGCAAGAGGAGGAGCACCCTTGGCTCACTTAGCTATCTACAAGGCTTGTTGGGACTTTCAAATTGGAGATTGCACTGATGCTGATATCCTGAAGGCTTTTGACAAGGCTATACATGATGGAGTTGATGTCTTAACTGTTTCTCTTGGCTCTTTCATTCCCTTGTACTCCTATGTTGATCAACGTGATGCAATAGCAATTGGGTCCTTTCATGCAACCGCTAAGGGAATCACAGTCGTCTGTTCAGCTGGAAATTCTGGTCCTATGTCTCAAACCATTGTAAATACTGCACCATGGATCATTACAGTTGGAGCTACTACAATAGATAGGGCCTTTCCAGCAGCCATCACCCTTGGAAATAATCGCACTGTGTGGGGACAGTCCATTGATACTGGAAAACATAATCTTGGATCTGTTGGGCTCACATATTCTGAACGCATTGCTCTAGACCCATCAGATAATTTAGCCAAGGATTGTCAATCTGGTAGTCTAAATGCAACAATGGCAGCAGGCAAAATTGTTCTTTGCTTTTCACTATCAGATGAACAAGACATTGTTTCTGCATCACTTACAGTCAAGGAAGCTGGAGGAGTTGGATTAGTATATGCACAATATCATGAAGATGGACTCACTGAATGTGATTTGTTTCCATGCATTAAGGTAGATTATGAAGTGGGGACACAAATATTAACCTATATTAGAAGATCAAGGTCTCCAAGAGCAAGCTTAAGTTTTCCAAAGACTGTTATTGGAAAATGGATATCTCCTCGAGTTGCATCTTTCTCATCTAGAGGACCTAGTAGCATGTCTCCAACGGTGCTGAAGCCTGACATAGCTGCACCAGGTGTGGACATTTTGGCTGCATTTCCACCAAAAGGCACTACAAAGAGTACTAGTTTTACATTCTTGTCTGGAACTTCAATGTCCTGTCCCCATGTGGCAGGAATAGCAGCTCTCATCAAATCCAAACACCCAACTTGGTCACCTGCAGCCATAAGATCAGCTTTGGTAACAACAGCCTCTCAAACTGGAACTGATGGAAACGTGATATCTGAAGAGGGTTCCACACTTAAGGCAGCAGACCCTTTTGATGTTGGGGGTGGACACGTGGACCCCAATAAATCAATGGATCCAGGACTCATATATGATATCACCACTGAGGATTATATCCAATTCCTATGCTCCATGGGTCACAGTAGTGCATCCATTAGCAAAGTGACCAAGACTACCACAAGTTGTAAGAAAGAAAAGCACCAAGCACTTAACCTCAACATTCCTTCCATATCAGTTCCAAACCTGAAGAGGGCTGCAACAGTCAAGAGAACAGTGACAAACGTGGGAAACATAACTGCAGTCTACAAAGCTCTGGTGAAGGTTCCAAATGGCATAAAAGTGAGAGTTGAACCTCAAACTTTGAGTTTCAATTCAGATACCCGAGTCCTTACTTTCAATGTTAGTTTCCTGTCAACTCAGAAGTTGCATGGATATTACAAATTTGGGAGCCTAACATGGACAGATGGCAAGCATTGTGTGAGGACCCCAATTGCTGTGAGGAACACACAGTTTGAATCTTAA 2328 0.4046 MDTNSRNWRLARKAQLLVASALLLLQNYLVISLEASSVHIVYMGEKIYQNPQTTKKYHHKMLSSLLGSKEAAKNSILYSYKHGFSGFAARLTKRQAEAIAKFPGVVSVIPNGIHKLHTTRSWDFMGIHHSTSKTAFSDSNLGEGTIIGVIDTGIWPESPSFNDEAMAQVPSRWKGVCQEGEHFNSTNCNKKIIGARWFLKGITNQTKKLLQGNNTNEYLSARDGIGHGTHTASTAAGYFVGNANYRGLASGLARGGAPLAHLAIYKACWDFQIGDCTDADILKAFDKAIHDGVDVLTVSLGSFIPLYSYVDQRDAIAIGSFHATAKGITVVCSAGNSGPMSQTIVNTAPWIITVGATTIDRAFPAAITLGNNRTVWGQSIDTGKHNLGSVGLTYSERIALDPSDNLAKDCQSGSLNATMAAGKIVLCFSLSDEQDIVSASLTVKEAGGVGLVYAQYHEDGLTECDLFPCIKVDYEVGTQILTYIRRSRSPRASLSFPKTVIGKWISPRVASFSSRGPSSMSPTVLKPDIAAPGVDILAAFPPKGTTKSTSFTFLSGTSMSCPHVAGIAALIKSKHPTWSPAAIRSALVTTASQTGTDGNVISEEGSTLKAADPFDVGGGHVDPNKSMDPGLIYDITTEDYIQFLCSMGHSSASISKVTKTTTSCKKEKHQALNLNIPSISVPNLKRAATVKRTVTNVGNITAVYKALVKVPNGIKVRVEPQTLSFNSDTRVLTFNVSFLSTQKLHGYYKFGSLTWTDGKHCVRTPIAVRNTQFES 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01819 775 PANTHER PEPTIDASE S8 29 773 - -
Cca09g01819 775 CDD PA_subtilisin_like 367 494 - -
Cca09g01819 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Cca09g01819 775 Pfam Subtilase family 142 594 IPR000209 GO:0006508|GO:0008236
Cca09g01819 775 CDD Peptidases_S8_3 114 592 IPR034197 -
Cca09g01819 775 Pfam Fibronectin type-III domain 673 768 IPR041469 -
Cca09g01819 775 Gene3D - 360 501 - -
Cca09g01819 775 Pfam Peptidase inhibitor I9 38 117 IPR010259 -
Cca09g01819 775 SUPERFAMILY Subtilisin-like 116 631 IPR036852 GO:0004252|GO:0006508
Cca09g01819 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 31 117 IPR037045 -
Cca09g01819 775 Gene3D - 644 771 - -
Cca09g01819 775 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Cca09g01819 775 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Cca09g01819 775 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Cca09g01819 775 Gene3D Peptidase S8/S53 domain 144 640 IPR036852 GO:0004252|GO:0006508
Cca09g01819 775 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 29 773 - -
Cca09g01819 775 ProSiteProfiles Serine proteases, subtilase domain profile. 121 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01819 Cca-Chr9 42914152 42918270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01819 36 769 Subtilisin-like Serine Gene Family AT1G32960 52.151 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01819 - - gmx:100792709 1394.02