Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01793 ATGGAAATTTTTCGTTCTCAGAATCGCAGTAACTTCTTGTCCTCCTCCAACGACGCCGTTTCGGTTCCCACCATTCCCCTCTATCGCTCCGCCCCGGCGCTCGAAGTCAGGCTTGAGGATTTCGAGTCCTTCGCCATCGACCGCCTCCGAGTTCTCAAGGGGATTTCTGATGGTTTGTCACGGGGAAAGAAACCTGACGAAATGGAAAATTTGGTAAAGGATCTGTGGAAAGTGAATATGAGACACCAACACGCATCTGAGGTTCTAAACAAGGATATTATATCTCATTTTGTTCTGCGTTTGGTGTATTGCAGAACGGAGGACCTGAGGAAATGGTTTCTTTCTATGGAATCTGCACTCTTTCGATACCGTTTTCGTCTTCTGAATGCTGAAGCTCAGAGGGCAGTCATGGATGAATTTGACCTTCCTTACAGGGCTGTTAGCAATGTGGAATTTGAGAGCATAAAAGAGAAATTGGGACAAGTTGCACGTTCTATGGGTCAGCCTTCACCCACTGCTGATGCTATCTTCTACAAGGTACCATTTGAAGAAGTTCCAGAGCTTGTTGCTGGACGGAAAGTGTTTATAAATCAAGGATATGCATATGTTGCAATGAATCAGATTGTTTCACTTGTAGCCACACTATTCCGCAGTCAGCTGTCAAAGACACTCATCCTTACTAACAGAAAATGGACATCTTCAATTAGAGAACAAGAAAAACATAGGTTGACTCCTATTGTGGAAGCCCTATGCTCAAGTTATCTGGGTCCTGATTATTCTCAGTCAAGAGAATATGGTGATATGTCATTAAAGGACATTGATCAAGTTGCCAAGAGCTCATTTCCTTTGTGCATGCGTCACCTATTTGATAAGCTGAGGGAGGATCATCATTTAAAGCATGGAGGGAGGATGCAACTAGGCCTCTTTCTCAAGGGTGTTGGCTTGAATTTGGATGATGCACTTGCGTTTTGGAGGGCGGAGTTCTCTAAAAAGGTTGGTTTGGAGAAGTTTGAGAAACAATATGCGTACAGCATACGCCATAATTATGGAAAGGAAGGGAAGAGAACTGATTATACTCCCTATTCTTGTCTAAAGATTATTTCATCTACTCCCGGAGCTGGAGATCATCATGGTTGCCCCTATCGACATTTCAGGCTCGGACACATTGAGTACATCCTATACATGTATCATAAATCTTTACTGAATGTGACATTGGATCGTAATCCTTGA 1230 0.4325 MEIFRSQNRSNFLSSSNDAVSVPTIPLYRSAPALEVRLEDFESFAIDRLRVLKGISDGLSRGKKPDEMENLVKDLWKVNMRHQHASEVLNKDIISHFVLRLVYCRTEDLRKWFLSMESALFRYRFRLLNAEAQRAVMDEFDLPYRAVSNVEFESIKEKLGQVARSMGQPSPTADAIFYKVPFEEVPELVAGRKVFINQGYAYVAMNQIVSLVATLFRSQLSKTLILTNRKWTSSIREQEKHRLTPIVEALCSSYLGPDYSQSREYGDMSLKDIDQVAKSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRAEFSKKVGLEKFEKQYAYSIRHNYGKEGKRTDYTPYSCLKIISSTPGAGDHHGCPYRHFRLGHIEYILYMYHKSLLNVTLDRNP 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01793 409 Gene3D - 3 250 - -
Cca09g01793 409 PANTHER DNA PRIMASE LARGE SUBUNIT 1 385 IPR007238 GO:0006269
Cca09g01793 409 CDD PriL_PriS_Eukaryotic 27 399 IPR016558 -
Cca09g01793 409 Pfam Eukaryotic and archaeal DNA primase, large subunit 177 393 IPR007238 GO:0006269
Cca09g01793 409 PANTHER DNA PRIMASE LARGE SUBUNIT 1 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01793 Cca-Chr9 42618971 42625421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01793 1 384 Core DNA Replication Machinery Family AT1G67320 66.429 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01793 K02685 - gmx:100806321 725.702