Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01776 ATGTGTCGGAGGATAACCATTTTACATATAAAAATTAATAAAAGAAATGATGCTATCTTCTACAAGGTACCATTTGAAGAAGTTCCAGAGCTTGTTGCTGGACGGAAAGTGTTTATAAATCAAGGATATGCATATGTTGCAATGAATCAGATTGTTTCACTTGTAGCCACACTATTCCGCAGTCAGCTGTCAAAGACACTCATCCTTACTAACAGAAAATGGACATCTTCAATTAGAGAACAAGAAAAACATAGGTTGACTCCTATTGTGGAAGCCCTATGCTCAAGTTATCTGGGTCCTGATTATTCTCAGTCAAGAGAATATGGTGATATGTCATTAAAGGACATTGATCAAGTTGCCAAGAGCTCATTTCCTTTGTGCATGCGTCACCTATTTGATAAGCTGAGGGAGGATCATCATTTAAAGCATGGAGGGAGGATGCAACTAGGCCTCTTTCTCAAGGTTGCTTTTGGCTGCCTTCTGGGCATAATTAAAAATACTCTAGAGTCTAGATGGTTAATAAGTTTGAGGTGTTAA 537 0.3818 MCRRITILHIKINKRNDAIFYKVPFEEVPELVAGRKVFINQGYAYVAMNQIVSLVATLFRSQLSKTLILTNRKWTSSIREQEKHRLTPIVEALCSSYLGPDYSQSREYGDMSLKDIDQVAKSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKVAFGCLLGIIKNTLESRWLISLRC 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01776 178 PANTHER DNA PRIMASE LARGE SUBUNIT 12 155 - -
Cca09g01776 178 Pfam Eukaryotic and archaeal DNA primase, large subunit 20 154 IPR007238 GO:0006269
Cca09g01776 178 Gene3D - 4 93 - -
Cca09g01776 178 PANTHER DNA PRIMASE LARGE SUBUNIT 12 155 IPR007238 GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01776 Cca-Chr9 42332903 42335423 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01776 17 154 Core DNA Replication Machinery Family AT1G67320 78.261 7.55e-76 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01776 K02685 - gmx:100816023 266.929