Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01772 ATGGCGCTGAGTCTGGGAGCCACTCCCGTTGTCATAAGCAGCCACCCCGAGACAGCTAAAGAGATTCTATTGGGCTCCTCGTTTTCGGATCGTCCCATAAAGGAAACCGCACGTGCTCTCATGTTCGACCGTGCCATTGGTTTCGCTCCTTCCGGAACCTACTGGCGACACCTGCGGAGGATCGCGGCCTTCCACATGTTCTCTCCGAGGAGGATTCAGGGCCTCGAGAGCCTCCGGCAGCGCGTGCTTCAGCGAATGCTCAACACCGCGTGGAGGGAGATGGAGGAGAAAGGGGTGGTGGAAGTTCGCGGCATGTTTCAGGAAGCCTCGCTCTGCAATATTTTGGAGACCGTGTTTGGGAGCAGTGATAAGAGGGAGGAGTTGGGTGACATGGTTAAGGAAGGCTATCACTTGATTGCCGAGTTTAATTTGGAAGATTATTTTCCTCTCAAGTTTTTCGACTTTTATGGGGTCAAGAGAAGGTGCCACAAATTGGCGGCTAAGGTCACTAGTGTGGTGGGGCAAATTGTGGAGGAACGAAAAAGAGAAGAGGGGTTCGTTGGGAAGAATGATTTTCTTAGCACTTTGCTTTCTTTGCCCAAACAAGAAAGGTTAGGTGATTCAGATATGGTGGCTATTCTGTGGGAAATGGTATTTCGAGGAACAGACACAGTGGCTATACTCTTGGAATGGATCATGGCTAGAATGGTTTTACACCAGGACGTACAAAAGAAAGCCCGCGAAGAAATTGACACGTGCATCGGCGAAAACAGCCACGTGCGAGACTCGGATATTCCGAATCTGCCTTACCTCCAGGCCATAGTAAAAGAAGTTCTCCGGCTGCACCCGCCAGGCCCACTACTATCATGGGCCCGCCTCGCGGTCCACGACGTCCACGTGGATAAGGTCCATGTGCCAGCTGGCACAACAGCGATGGTTAACATGTGGGCCATATCGCATGACTCGTCTATCTGGGAGGACCCATGGGCTTTCAAGCCCGAGAGGTTCCTGAAAGAAGACGTTTCCATCATGGGATCGGACTTGAGGCTTGCGCCGTTCGGGGCTGGACGTAGGGTGTGCCCGGGTCGGGCCTTGGGCTTGGCCACGGCCCATCTCTGGCTCGCACAACTCCTACGCCACTTCGTATGGCTTCCGGCACAACCTGTGGTTGATCTTTCAGAATGCCTTAGGCTTTCCATGGAAATGAAGACACCTCTGCAATGTCTAGTGGTTCGTCGATaa 1242 0.529 MALSLGATPVVISSHPETAKEILLGSSFSDRPIKETARALMFDRAIGFAPSGTYWRHLRRIAAFHMFSPRRIQGLESLRQRVLQRMLNTAWREMEEKGVVEVRGMFQEASLCNILETVFGSSDKREELGDMVKEGYHLIAEFNLEDYFPLKFFDFYGVKRRCHKLAAKVTSVVGQIVEERKREEGFVGKNDFLSTLLSLPKQERLGDSDMVAILWEMVFRGTDTVAILLEWIMARMVLHQDVQKKAREEIDTCIGENSHVRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAVHDVHVDKVHVPAGTTAMVNMWAISHDSSIWEDPWAFKPERFLKEDVSIMGSDLRLAPFGAGRRVCPGRALGLATAHLWLAQLLRHFVWLPAQPVVDLSECLRLSMEMKTPLQCLVVRR 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01772 413 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 1 413 - -
Cca09g01772 413 Gene3D Cytochrome P450 1 410 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01772 413 PRINTS E-class P450 group I signature 229 255 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01772 413 PRINTS E-class P450 group I signature 314 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01772 413 PRINTS E-class P450 group I signature 360 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01772 413 PRINTS E-class P450 group I signature 350 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01772 413 PRINTS E-class P450 group I signature 209 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01772 413 PRINTS E-class P450 group I signature 272 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01772 413 PRINTS P450 superfamily signature 220 237 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01772 413 PRINTS P450 superfamily signature 351 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01772 413 PRINTS P450 superfamily signature 273 284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01772 413 SUPERFAMILY Cytochrome P450 3 413 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01772 413 Pfam Cytochrome P450 3 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01772 413 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 353 362 IPR017972 GO:0005506|GO:0016705
Cca09g01772 413 PANTHER CYTOCHROME P450 78A7-RELATED 1 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01772 Cca-Chr9 42300328 42302038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01772 1 413 Cytochrome P450 AT1G13710 56.440 5.97e-169 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01772 - - gmx:100817944 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00088 01 907999 910468 Cca09g01772 09 42300328 42302038 PCT