Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01770 ATGGAGAACTTATCAGTACAGAAGAACATCCTCAAAACTCCAGCTCTTCTTAAGTACATCTTTGAAACGAGTGGCTATCCCAAAGAGCACGAGCAATTGAAGCAACTCCGAGAAACAACAGTGCAGAAATACGGGAATAAGAGTTTGATGAATGTGCCAGTAGATGAGGCCCAGTTCATGTCTATTCTACTTAAAGTCATGAACGCGAAGAAAACACTAGAAATTGGAGTTTTCACGGGTTATTCTCTTCTTTCTACAACAGCTCTTGCTCTTCCTTCTGATGGCAAGATAATAGGAATTGACGTGGATAGAGAAGCGTATGAAACTGGATTGCCCTTCATGCAAAAGGCAGGAGTGGAGCACAAAATTGACTTTATCCAAGCGGATGCATTATCGGCACTTCATGATCTTATAGATGTAATAGTTCTGGATTTTCATGATAATAGTGTACTGGAGAAAGTCACTGGTGTGTTCTATTCAATATTGTTTTTGAATGCGAAATTGGTGAAGAATGGTGGAATAATTGCATTGTGGAATGGTACAGTGGCCATGTCCGAAGAGGAAAAATTTGAGGGCATACTGTGGGAAAATAGGAAGCCTACAATGGAATTCAACAGCTACATAGCGAATGATAAACGCATTGAGTCATCAATTCTT 657 0.3988 MENLSVQKNILKTPALLKYIFETSGYPKEHEQLKQLRETTVQKYGNKSLMNVPVDEAQFMSILLKVMNAKKTLEIGVFTGYSLLSTTALALPSDGKIIGIDVDREAYETGLPFMQKAGVEHKIDFIQADALSALHDLIDVIVLDFHDNSVLEKVTGVFYSILFLNAKLVKNGGIIALWNGTVAMSEEEKFEGILWENRKPTMEFNSYIANDKRIESSIL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01770 219 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 219 IPR002935 GO:0008171
Cca09g01770 219 Pfam O-methyltransferase 22 219 IPR002935 GO:0008171
Cca09g01770 219 PANTHER O-METHYLTRANSFERASE-RELATED 6 219 - -
Cca09g01770 219 PANTHER FLAVONOID 3',5'-METHYLTRANSFERASE-LIKE 6 219 - -
Cca09g01770 219 CDD AdoMet_MTases 73 178 - -
Cca09g01770 219 Gene3D Vaccinia Virus protein VP39 2 219 IPR029063 -
Cca09g01770 219 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 218 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01770 Cca-Chr9 42259285 42268771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01770 8 215 Monolignol Biosynthesis Gene Families AT1G67990 51.415 6.66e-63 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01770 K00588 K13272 gmx:100813350 285.419