Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01756 ATGGCTGCTGGGAGACATGGCGGTTACCGCGAAAACGAGTTCAGAGAGCGCGAATCCAAATTGGAAGTGTCTAGACGCGGATTCGCGAACTCCAAGGAAGATTATGATCGTGTTAGGAATggtggcggtgacgctgtgagaggtgggtcaagggatagggttagggtgaggcagagggATATTAAGGAGAGGGAAGGTGTTAATGGTGGTTACCGTTCCTCTTCCAGTCGGAGTGACTCTGGCAGCAGTGGCCTCGGTCCTCGCCGGTGTGATTTCTCTGTCAAGACCATGGATAGAGAGCCTGGTGAGCTTTCCAGTGAGAGTGGTTCTGATGATGCTATTGAATCAGAGTTGGGGGTGAAAGATTCAGAGGTTGCCATCTTGGAAGAGAACAAGGCTCCATCACCTCCGGTGCCAGAGAGGAAGAGGAAATTTTCGCCCATAGTGTGGGATCAGGATGACAAGGAAGTCAACGAGTCATCCAAAGTTAGGGTTTCTGCCTCGGCGGTGGCGGCTCTTCCTCCTCCACCGCCGTTGCCGAAGGTGTTCCGCCAGTCGCAGTCTCCGAATACTCCGTATGGTGGAGTTGAGATAAATCCTGTTAAGAACAGGCACACTGAGGATGTTCAGTTGAATGCAGCATCAAAGGTTGTCTTGCCCTCTCCTTCAGTTTTGCATTCCTCGCCGCAGAGAGGGAGCTGGGGCAATGATCAGGAAGCCGAGCATCCAGAAGGTGAAGATTATGTTCCAACTCGCAATATATCCTCTTCTAGATGGGCAGCTGGGGATAACTCTCCTGGTGATGAGGGCGAAATCCTCAATGATGAGGAAATGCCCAAAAGGAGGAGGAGGGTGTCTCCTGAAGTATTGGATAGAAGAGTAAGGAACAAGCTATTGAGCCCTCAAGAATCAAAGATAGAAGGTATGGAAGGAGCTAGAGCCAGGTCATCGGAATCTGAAGAAAGAGGTGTTCGAGGGAGAACATCCAGTGGCGATGATCATCCTGGTGTTGAGTCAGAGAAGGATGACTACATGGAGATGGATGCTCAAGGTGGCAAAAGTGAAACCAGTGTTAGTCACTCAGACACGGATTCTGAAGATGAAGATGATGGCCGGGAGACTCCAGAACCACCAGCTCCACCACAAAGAACAGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAAGGAACATATGGTGTTGTATATAGGGCTAGGGATAAAAAAACTGGAGAAATTGTAGCATTGAAGAAGGTCAAGATGGAGAAGGAAAAAGAGGGTTTCCCATTGACTTCTCTTAGGGAAATAAATATTCTTCTTTCTTTTCACCACCCATCCATAGTTGATGTCAAGGAAGTAGTAGTAGGAAGTAGCCTTGATAGCATTTTCATGGTCATGGAATATATGGAACATGACCTTAAAGGACTAATGGAGGCAATGAAGCAACCTTTTAGCCAGAGTGAAGTGAAGTGCTTGATGATCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAATTGGGTGCTTCATAGAGATTTAAAGACTTCAAACCTGCTTCTAAATAACAGGGGTGAGCTCAAAATTTGTGATTTTGGCTTGGCTCGTCAGTATGGGAGCCCTTTAAAACCATATACACACCTGGTGGTTACTCTGTGGTACAGGGCACCTGAACTTCTTCTAGGGTCAAAACAGTATTCAACAGCCATTGACATGTGGTCTTTAGGTTGTATAATGGCTGAACTATTATCTAAGGAACCACTGTTTAATGGTAAAACGGAATTTGATCAACTTGACAAGATTTTCCGGATTCTTGGCACACCAAATGAAACAATTTGGCCTGGCTTCTCAAAATTACCTGGTGTCAAGGTCAATTTTGTCAAACACCAGTTTAACCTCCTGCGTAAAAAATTTCCTGCCACGTCATTCACTGGATCTCCTGTCCTTTCTGATTCTGGATTTGATTTGCTGAACAAGCTTCTAACTTATGACCCTGAAAAGCGAATCACTGCTGAGGCTGCTCTCAATCATGAGTGGTTTCGTGAAGTTCCTCTTCCCAAGAGTAAAGAATTCATGCCTACATTTCCTGCTCAACATGCTCAGGACAGGCGTGTGCGGAGAATATACAAGAGTCCAGATCCTCTAGAGGAGCAGCGCAGGAAGGAGTTACAGCAGGGTGAAACAGGGACTGGTGGAATTTTTGGCTGA 2232 0.4471 MAAGRHGGYRENEFRERESKLEVSRRGFANSKEDYDRVRNGGGDAVRGGSRDRVRVRQRDIKEREGVNGGYRSSSSRSDSGSSGLGPRRCDFSVKTMDREPGELSSESGSDDAIESELGVKDSEVAILEENKAPSPPVPERKRKFSPIVWDQDDKEVNESSKVRVSASAVAALPPPPPLPKVFRQSQSPNTPYGGVEINPVKNRHTEDVQLNAASKVVLPSPSVLHSSPQRGSWGNDQEAEHPEGEDYVPTRNISSSRWAAGDNSPGDEGEILNDEEMPKRRRRVSPEVLDRRVRNKLLSPQESKIEGMEGARARSSESEERGVRGRTSSGDDHPGVESEKDDYMEMDAQGGKSETSVSHSDTDSEDEDDGRETPEPPAPPQRTVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQFNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRVRRIYKSPDPLEEQRRKELQQGETGTGGIFG 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01756 743 MobiDBLite consensus disorder prediction 135 161 - -
Cca09g01756 743 Gene3D Phosphorylase Kinase; domain 1 382 479 - -
Cca09g01756 743 MobiDBLite consensus disorder prediction 308 349 - -
Cca09g01756 743 CDD STKc_CDC2L1 391 688 IPR045267 GO:0004674|GO:0005524|GO:0006468
Cca09g01756 743 MobiDBLite consensus disorder prediction 221 235 - -
Cca09g01756 743 PANTHER CELL DIVISION PROTEIN KINASE 164 743 - -
Cca09g01756 743 SMART serkin_6 397 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01756 743 MobiDBLite consensus disorder prediction 8 67 - -
Cca09g01756 743 MobiDBLite consensus disorder prediction 69 83 - -
Cca09g01756 743 PANTHER - 164 743 - -
Cca09g01756 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
Cca09g01756 743 MobiDBLite consensus disorder prediction 273 300 - -
Cca09g01756 743 MobiDBLite consensus disorder prediction 717 743 - -
Cca09g01756 743 MobiDBLite consensus disorder prediction 114 128 - -
Cca09g01756 743 Gene3D Transferase(Phosphotransferase) domain 1 480 719 - -
Cca09g01756 743 Pfam Protein kinase domain 397 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01756 743 MobiDBLite consensus disorder prediction 717 732 - -
Cca09g01756 743 MobiDBLite consensus disorder prediction 92 106 - -
Cca09g01756 743 MobiDBLite consensus disorder prediction 1 385 - -
Cca09g01756 743 ProSiteProfiles Protein kinase domain profile. 397 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01756 743 SUPERFAMILY Protein kinase-like (PK-like) 389 694 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01756 Cca-Chr9 42100878 42104197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01756 388 733 Core Cell Cycle Gene Families AT5G10270 44.142 2.28e-94 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Cca09g01756 Pkinase 1.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01756 K08818 - gmx:100792524 1270.37