Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01748 ATGGACGCCTTGGATTCTGTGCTGGGAATGGCCAATGTGGCATTCTTCTACGCGATTTTGATATGGCTTTTGCTCCACAGCCTCAGACAAACCACGCGTGCTCATGTTCGTGCTGTGCATTTCAAACCAGGACCAATGGTTTTCGCTGTGGTCACTGTTCTCGCCAGTGTTATTGTTTCGGTTATGAACATTGCTCTTGCTTATTACCAGTTTAGTTCTAAGAGAATCTTAGGATATGGCTCTGTTTCCTTGCCTCTAACATGGGTTCTGGCTACTATGGTTTCGTTTTATTCAATGAGGACTAGAGTGAGGGAGAACAAAAGGTTCCCCCTTGTTCTCATCCTATGGTGGGTTTTTGCTTGTGTCATAGATGCACTCTCGCTGTGTATGAAGATGGTGAAGGATTTTGAATCGATGAGCTTCTGGGTTTTTTTGTCGGAGGATAACGTAGTTGATGCGGTTTCTTTGCCCTTGTTGATACTTCTCTGTTTCAATGTGTGTACAAGGGAGCACAGTCATACGGAACAAGAACAACTGTTACTGCAGAAAGAAGTGGAGAGAGAAGAGGAAGAGGTCTACACAAACGCGAGCACGTGGAGCAAACTCACATTCCGATGGTTGAACCCGGTTTTCGATACGGGTCGGGTTAAAAAACTTGAACTTGCTGATATTCCTCCTGTTCCTCATTCTGAAACGGCGGAAAGTGCTTCTTCGGTGTTGGAAGAATCACTTCGGAGACAGAAACTTGAAGGGGGTTACTTGACATGGGCTATTGCTCATTCTATACGGAAGTCCATGGCCTTAAATGCAGTTTTAGCAGGTGTTAACACAGGTGCCTCCTATATAGGTCCCGTGTTGATCACACAATTTGTCAATTTTTTAATGGGGCATGATGGTGATTCAAGCATCCAATATGGAATGCTTCTTGCATTCATTTTCTTCCTCTCAAAGACTCTGGAGTCTCTGAGTCAAAGACAATGGTATTTTGGTGCTCAACGAATAGGAATCCGGGTGCGTGCAGCTCTTATGTCTCTGGTTTATAGCAAGTCCCTATCTATGAAGTGTGCTGGATCAACACAAGGTAAAATCATCAATTTGATCAATGTGGATATTGAGAGAATTGGGGACTTCTGCTGGTTCATTCATGGAGTTTGGTTGCTTCCAGTTCAGGTCATTTTGGCCTTGTTAATCTTATACATAAATCTGGGTTATATCCCTTCTATTGCTGCACTTGTTGTCACCATGTTGGTCATGGTGTGCAACACACCTTTGGCCAATAAGCAAGGAGATTTGCACTCTAAGATCATGGAGTCTAAGGATGCAAGAATCAAAGTGACATCAGAGACCATGAAGAATATCAGAATTTTGAAATTGCATTCATGGGAAAACACGTTCTTTCATAAGCTCCTCCAACTTAGGGAATCTGAGAGGAAGTGGTTGCAGAAATACCTCTATACATGCTCAGCCATAGCCACACTATTCTGGACATCTCCAACTTTAGTTTCTGTTGTCACATTTGGTGCTTGTATCCTGGTGAAAACAGAACTAACAGCAGCTACGGTCCTCTCAGCTTTAGCAACTTTTCGTATTTTGCAAGAACCAATATACAACTTACCAGAGCTTATCTCCCAGATCATTCAAACAAAAGTATCTCTTGATCGAATCCAGGAATTCATTAAGGAAGAGGATCCAAACCAATTCATAAAAAGGCATACTCCAAAAATTTCAGCAGTTGCTATTGAAATTAAGCCAGGCGAATATGCATGGGAATTAAATGATCAAACCCACGAGAAACCAACTATTCAAATTACAGGAAAGTTGGTTATAAAGAAGGGTCAGAAGGTAGCAGTTTGTGGGTCAGTGGGGTCTGGCAAATCAAGTTTGCTCTGCTGTATGCTTGGGGAGATTTCATTAGTTTCTGGGGCAGTAACCAAAGTCTATGGGACTAGAAGTTATGTACCCCAAAGTCCATGGATTCAGTCTGGAACTGTAAGAGACAATATATTGTTTGGCAAGCAAATGAACAAGGACTTTTATGAAGCTGTTTTGGATGGTTGTGCTTTGAACCAGGACATCAGCATATGGGGTGATGGGGATTTGACCCTGGTAGAGGAGAGGGGCATAAACTTAAGCGGCGGCCAGAAACAGCGTATTCAGTTGGCAAGGGCTGTTTACAATGATTCAGATGTTTATTTCCTCGATGATCCTTTTAGTGCAGTTGATGCTCATACTGGAACCCATTTGTTTAAGAAATGTCTCATGAAACTTCTGTATGATAAAACGGTTGTCTATGCTACACATCAACTGGAATTTTTGGAAGCTGCAGACCTCGTTTTGGTTATGAAAGATGGAAGAATAGTAGAGTCTGGAAGGTATAAAGATCTCATAGCATGTCCAAACTGTGAACTTGTTCAACAAATGGCTGCTCACCAAGATGCAGTAAACCAAATAAATCCATGCCAGGAAGATGAATCTGCCAGCTGCAGACCCTGCCAAAAAAATCAAATTGAAGTTGCTGAAGAAACTATTCAAGAGATCAACGATGATTGGAGCAGAAATAAAGAAGAGGAAGCAGAGATGGGTCGAGTGAAATGGAGTGTTTACTCAACCTTTGTCACATCAGCTTATAAAGGAGCACTTGTTCCGGTTATTCTTCTCTGCCAAGTTTTCTTTCAAGCTTTACAGATGGGAAGCAATTATTGGATGTCTTGGGCCACAGAGCAGAGGGGCAGGGTCAACAACAAGCAGCTTATGGGAATATTTGTTCTTCTATCCTGTGGTGGCACCATCTTCATACTGGGAAGGACTATTTTAATGTCAGTTGTTGCCGTGGAAACTGCTCAACGCCTTTTTCATGGGATGATCACATCAATTTTCAGGGCACCTATTTCATTTTTTGACACCACACCTTCAAGCCGAATTATGAGTAGGTCTTCAACGGATCAAAGTACTGTAGACACAGACATACCATACAGATTAGCTGGACTCGTATTTGCACTTATCCAGTTATTGAGTATCATTGTGCTAATGTCCCAAGTTGCCTGGCAAATCATGCTCGTCTTTCTTGTGGTGCTTGCTATTTCCATTTGGTATCAGGCTTATTACATCACAACAGCCAGGGAATTAGCCCGGATGGTAGGGATTCGAAAGGCACCAATCTTGCATCACTTTTCAGAATCAATTGCTGGCGCTGCCACAATCCGCTGTTTCAATCAGGAGCAACTATTCTTGACCAAAGTTGAGGCTCTAATTGATGATTATTCTCGGGTAGCCTTTCACAATTTTGGCACCATGGAATGGTTGTCTGTCCGAATCAATTTCCTCTTCAATTTGATCTTCTATTTTGTTCTCGTCATCTTGGTTACTCTACCAAAGTCTACAATTGATGCAAGCTTGGCAGGACTGGTAGCTACTTATGGTTTGAACTTGAATGTCCTTCAGGCTTGGGTGATATGGAATCTTTGCAATGTTGAGAACAAAATGATATCAGTAGAGAGGATATTGCAGTTCTGTAGATTACCAAGTGAAGCGCCATTAATTATCCAAGATTGCAGGCCTGAACCATTATGGCCAAAGGAGGGAAAAATTGAACTTCATAACCTTCATATACGGTATGATCCAGCTGCTCCTATGGTCCTAAAAGGTGTCACTTGTGTCTTCCCAGGACAAAAGAAAATTGGTATAGTAGGCAGAACAGGGAGTGGAAAATCTACACTGGTGCAAGCCCTTTTCCGAGTGGTGGAATCTTCAGAAGGATGTATAGTTATTGATGGTGTAGATATTTCCAAGATTGGTCTGCAAGATTTAAGATCCAAGCTTGGTATAATTCCTCAGGATCCAACCTTGTTTCTAGGTACTGTAAGGACTAACTTGGATCCTCTTGAAGAACATGCAGATCAAGAACTTTGGGAGGTTCTCAGAAAGTGCAATCTTGCTGAAATAGTAAGGCGGGATCCAAGACTTCTTGATGCACCAGTGGCTGAGAATGGAGAGAATTGGAGTGTTGGACAAAGGCAGCTTGTTTGCCTTGCTAGGCTACTACTGAAGAAAAGAAGAATTTTGGTACTAGATGAGGCAACTGCATCCATTGACACTGCCACTGACAATTTAATTCAGAAGACAATTAGAGAAGAAACCAGTGGATGCACAGTCATTACAGTAGCACATAGAATTCCTACAGTTATTGACAACGATTTGGTTTTGGTCCTTGATGAAGGAACAATTGTGGAGTATGACCAACCGGCTCAATTGCTACAGAACAACTCTTCTTCGTTCTCAAAGTTAGTCTCAGAATTTTTGAGGAGATCAACCAAAACTTAG 4320 0.4201 MDALDSVLGMANVAFFYAILIWLLLHSLRQTTRAHVRAVHFKPGPMVFAVVTVLASVIVSVMNIALAYYQFSSKRILGYGSVSLPLTWVLATMVSFYSMRTRVRENKRFPLVLILWWVFACVIDALSLCMKMVKDFESMSFWVFLSEDNVVDAVSLPLLILLCFNVCTREHSHTEQEQLLLQKEVEREEEEVYTNASTWSKLTFRWLNPVFDTGRVKKLELADIPPVPHSETAESASSVLEESLRRQKLEGGYLTWAIAHSIRKSMALNAVLAGVNTGASYIGPVLITQFVNFLMGHDGDSSIQYGMLLAFIFFLSKTLESLSQRQWYFGAQRIGIRVRAALMSLVYSKSLSMKCAGSTQGKIINLINVDIERIGDFCWFIHGVWLLPVQVILALLILYINLGYIPSIAALVVTMLVMVCNTPLANKQGDLHSKIMESKDARIKVTSETMKNIRILKLHSWENTFFHKLLQLRESERKWLQKYLYTCSAIATLFWTSPTLVSVVTFGACILVKTELTAATVLSALATFRILQEPIYNLPELISQIIQTKVSLDRIQEFIKEEDPNQFIKRHTPKISAVAIEIKPGEYAWELNDQTHEKPTIQITGKLVIKKGQKVAVCGSVGSGKSSLLCCMLGEISLVSGAVTKVYGTRSYVPQSPWIQSGTVRDNILFGKQMNKDFYEAVLDGCALNQDISIWGDGDLTLVEERGINLSGGQKQRIQLARAVYNDSDVYFLDDPFSAVDAHTGTHLFKKCLMKLLYDKTVVYATHQLEFLEAADLVLVMKDGRIVESGRYKDLIACPNCELVQQMAAHQDAVNQINPCQEDESASCRPCQKNQIEVAEETIQEINDDWSRNKEEEAEMGRVKWSVYSTFVTSAYKGALVPVILLCQVFFQALQMGSNYWMSWATEQRGRVNNKQLMGIFVLLSCGGTIFILGRTILMSVVAVETAQRLFHGMITSIFRAPISFFDTTPSSRIMSRSSTDQSTVDTDIPYRLAGLVFALIQLLSIIVLMSQVAWQIMLVFLVVLAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGAATIRCFNQEQLFLTKVEALIDDYSRVAFHNFGTMEWLSVRINFLFNLIFYFVLVILVTLPKSTIDASLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERILQFCRLPSEAPLIIQDCRPEPLWPKEGKIELHNLHIRYDPAAPMVLKGVTCVFPGQKKIGIVGRTGSGKSTLVQALFRVVESSEGCIVIDGVDISKIGLQDLRSKLGIIPQDPTLFLGTVRTNLDPLEEHADQELWEVLRKCNLAEIVRRDPRLLDAPVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTATDNLIQKTIREETSGCTVITVAHRIPTVIDNDLVLVLDEGTIVEYDQPAQLLQNNSSSFSKLVSEFLRRSTKT 1439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01748 1439 Gene3D - 1179 1432 IPR027417 -
Cca09g01748 1439 SMART AAA_5 1222 1413 IPR003593 -
Cca09g01748 1439 SMART AAA_5 611 785 IPR003593 -
Cca09g01748 1439 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1196 1430 IPR003439 GO:0005524
Cca09g01748 1439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1187 1422 IPR027417 -
Cca09g01748 1439 Pfam ABC transporter 607 737 IPR003439 GO:0005524
Cca09g01748 1439 Pfam ABC transporter 1213 1361 IPR003439 GO:0005524
Cca09g01748 1439 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 582 808 IPR003439 GO:0005524
Cca09g01748 1439 CDD ABCC_MRP_domain2 1194 1414 - -
Cca09g01748 1439 CDD ABC_6TM_ABCC_D1 268 555 IPR044746 GO:0140359
Cca09g01748 1439 Gene3D - 590 828 IPR027417 -
Cca09g01748 1439 Coils Coil 171 191 - -
Cca09g01748 1439 Gene3D ABC transporter type 1, transmembrane domain 253 564 IPR036640 GO:0005524|GO:0016021
Cca09g01748 1439 Gene3D ABC transporter type 1, transmembrane domain 846 1177 IPR036640 GO:0005524|GO:0016021
Cca09g01748 1439 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 110 1437 - -
Cca09g01748 1439 SUPERFAMILY ABC transporter transmembrane region 882 1176 IPR036640 GO:0005524|GO:0016021
Cca09g01748 1439 CDD ABCC_MRP_domain1 580 785 - -
Cca09g01748 1439 CDD ABC_6TM_ABCC_D2 881 1171 IPR044726 GO:0140359
Cca09g01748 1439 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 267 547 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cca09g01748 1439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 606 798 IPR027417 -
Cca09g01748 1439 Pfam ABC transporter transmembrane region 889 1126 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cca09g01748 1439 Pfam ABC transporter transmembrane region 268 534 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cca09g01748 1439 ProSitePatterns ABC transporters family signature. 710 724 IPR017871 GO:0005524
Cca09g01748 1439 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 883 1159 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cca09g01748 1439 PANTHER OS01G0902100 PROTEIN 110 1437 - -
Cca09g01748 1439 SUPERFAMILY ABC transporter transmembrane region 256 563 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01748 Cca-Chr9 42020788 42026864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01748 598 830 Calmodulin-binding Proteins AT2G36910 28.800 4.78e-18 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01748 - - gmx:100809063 2407.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01748 09 42020788 42026864 Cca09g01748 09 42020788 42026864 ECH