Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01743 ATGGAAATGAAATTAGTATCCAGAGAAACCATGAAACCCTCCACACCCACCCTTCCTCACCTCAGAACCTATCCCCTCTCCTTCATAGACAACATCGTTTTCCGCAACTACGTTCCATTACTCTTCTTCTACTCTCCAAACCCTAACCATGACCAAGCCTCCATAATACCAACCCTCAAAAAATCCCTATCCCAAGTCCTATCCCGCTACTACCCCTTAGCAGGCACCTTCAAAGATCAAATTTCCATTGATTGCAACGACCAAGGTGCTTCGTTACTGGTCACAAACTCAACATGCAACCTCTCCTCCATCCTCCGCAACCCCACCGAAGCATCGCTGAACCCTCTTTTCCCCGATGGACTACAGTGGAAGCCCATGAACGCTTCTTCAACCATATTGGTTATTCAAATAAACTCATTCGCCTGCGGAGGAATCGCAATCAGCGTCTGCATGTCTCACAAAGTTGCCGACGCCGCCACTCTTTCGAATTTCATCAACGACTGGGCCACACTCAACCGTCAACAACAACCGCCACCACCCTTCCCAGTTCCCGCTGCTTCCTTTTTCCCGCAAGAGAATCTCCCTCTTTTCCCAGAAGCCGCGTTCGTCGAAAACGACACCGTTTGCAGAAGGTTGGTGTTTGAGGCCTGCAAAATCGACTCACTGAAAGCCCTAGTGTCCTCTTACAAAGTGGATAACCCCACGCGCGTGGAAGTCGTCAGCGCGTTGATTTACGCGCGCGTGGTTGCCGCTCTAGGGCTGAGTCCCTCAACGACGTCGTTCCGCACCGCCGTGAACCTCCGGAGGAGGACGGTTCCGCCTCTTCCCGAGAACAGCGTAGGGAACTTGGTTTGGTTCCTGTTCGTGTTTCAGCCGCGCGAGATAAAGGTTCATGAGTTGGTGGTGAGAATGAAGGAAGGGTTGCGCGAGTTTTGTGGCACGTTTGCGAGGAAGTTCGGAGGGGAGGGTAGGGACTCGAGGTTCATATCGGAGTGCCTGAAGCAAGCTACTTCGGTTCCCGAGGCTGAGGAGAGTGGAGGCTTGGTTTGTTGTGCGAGTTGGAGCGGGTTTCCGATGTATGAAGCGGATTTCGGGTGGGGGAAACCGGTGTGGTTCACCACTAGTGGGTGCCCCGTGAGGAATAGCGTGGTTTTGATGGATGCGAGAGATGGGGGTGGGGTTGAAGCGCTTGTCAACATGGAAGAGAAAGACATGGCTAGGTTTGAACGTGACGATGAGCTTCTCAGATATGCTTCTATTAATCCAACACTTGGAGAATGGTGA 1284 0.521 MEMKLVSRETMKPSTPTLPHLRTYPLSFIDNIVFRNYVPLLFFYSPNPNHDQASIIPTLKKSLSQVLSRYYPLAGTFKDQISIDCNDQGASLLVTNSTCNLSSILRNPTEASLNPLFPDGLQWKPMNASSTILVIQINSFACGGIAISVCMSHKVADAATLSNFINDWATLNRQQQPPPPFPVPAASFFPQENLPLFPEAAFVENDTVCRRLVFEACKIDSLKALVSSYKVDNPTRVEVVSALIYARVVAALGLSPSTTSFRTAVNLRRRTVPPLPENSVGNLVWFLFVFQPREIKVHELVVRMKEGLREFCGTFARKFGGEGRDSRFISECLKQATSVPEAEESGGLVCCASWSGFPMYEADFGWGKPVWFTTSGCPVRNSVVLMDARDGGGVEALVNMEEKDMARFERDDELLRYASINPTLGEW 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01743 427 Gene3D - 205 416 IPR023213 -
Cca09g01743 427 Pfam Transferase family 4 414 - -
Cca09g01743 427 PANTHER F21J9.9 5 423 - -
Cca09g01743 427 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 423 - -
Cca09g01743 427 Gene3D - 1 196 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01743 Cca-Chr9 41954375 41955871 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01743 27 410 Monolignol Biosynthesis Gene Families AT5G48930 25.517 1.27e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01743 - - gmx:100806928 637.491