Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01741 ATGGCTTTATCTTCTCTCTTTCTTGTTTTAATTCCATTCTTGACATCATTCGCTGTTAGCCAACTTGAAGAATTTGTTAGCATTGATTGTGGAGGAACGAGTAACTACACTGATAGCAAAACGGGGTTGGCATGGATCTCAGATTCTGGGATCATGCAACATGGCATTTCGGTGGAAGTAGAAAGTCCAAATGGAAGCATGGTGCAGTATCAAAGGCGAAGAGATTTTTCCATAGACAGCAAGAAGTACTGTTACACACTAAGCACAGAGGAGAGAAGAAGATATTTGGTGAGAGCAACGTTTCAGTATGGAAGTTTGGACAGTGGGGACACATACCCTCAGTTTCAGCTCTTCTTGGATGCAACCAAATGGGCTACTGTGTCAATATATGATGCATCAAGAATATATGTCAAGGAAATGATCATCAGGGCACCCTCAAATTCTATTGATGTCTGCATGTGCTGTGCCACAACTGGTTCTCCTTTCATATCTACTCTTGAGCTCAGGCCCTTGAATCTTTCAATGTATGCCACAGATTTTGAGGACAATTTCTTCTTGGAAGTTGCTGCAAGAATAAACTTTGGTGCTCCAACTGAGGATGCTGTCAGGTACCCGGATGATCCATATGATAGAATTTGGGATTCTGATCTTATTAGAAGGCAAAATTATCTTGTTGGGGTGGCCCCAGGAACAGAAAGAATTAGCACTACAAGGGACATAGATGTAGATACAAGAGAATATCCACCTGTTAAAGTTATGAAAACTGCAGTTGTTGGCACAAGAGGTGTATTGAGCTACAGATTAAACCTGGAAGACTTCCCTGCCAATGCTAGAGCCTATGCATATTTTGCAGAAATTGAAGATTTAGGTAAGAATGAGAGTCGAAAATTCAAATTAAAGCAACCTTATATAGCTGACTATAGCAATGCAGTGGTTAACATTGCTGAGAATTCCAATGGGAGCTACACTTTATATGAACCAAGTTACATGAATGTGACTCTGGAATTTGTTTTATCATTCTCCTTTGTTATGACCCCGGATTCTACTCGAGGACCTCTTCTAAATGCATTGGAAATAAGCAAATATGTACAAATTGCTTCAAAGACAGACAAACAAGACACAATGGTTGTAAAGGCATTTCGATTCTTCTCTAGTGAAAGTTCACAGACAAATGAAGGTGATCCTTGTGTTCCAACTCCTTGGGAATGGGTGAATTGTAGTGCCACCACTCCACCAAGAATTACTAAAATAATTCTTTCGAGAAGGAATGTGAAGGGTGAAATCCCACCCGAGCTTAGCAACATGGAATCGTTGACAGAACTGTGGTTAGATGGAAACTTGCTTACTGGATCATTACCTGACATGAGCAAACTTATAAATCTAAAGATTGTACATTTAGAGAACAACAAGTTGAGTGGTCGACTTCCATCTTACCTGGGTAGTTTGCCAAGCTTACAAGCACTGTTCATACAGAACAACTCATTTAGTGGGGAAATACCAGCCAGATTAGTGTCTGATAAAATCATTTTCAACTTTGAGGGTAATCCTGGACTATATAGAGGAAACAAGAAGCATTTTAAGTTGGTTGTGGGAATTTCAATTGGAGTACTAGTGATTCTGTTAATATTGTTCTTAGTAAGCTTGATACTATTGCTTAATACAAGGAGAAATGCATCTCAAAAGAAACGTGAGGAAAAAGGCATTTCTGGACGCACTAACAGTAAACCTTTAACTGGATACTCATTTCTTCGGGGTGGAAGTTTAATGGATGAAAGTACTACTTGCCATATTACTCTCTCAGAGTTGAAAGAAGCTACTGACAATTTTTCAGAGAAAATTGGCAAAGGAAGCTTTGGAACTGTCTACTATGGGAAAATGAGAGATGGAAAAGAAATAGCAGTTAAGAGTATGAGCGAATCATCCTGCAATGGGAACCAGCAATTTGTTAATGAGGTGGCCCTCCTATCCAGAATTCATCACAGAAATTTGGTTCCCTTGATTGGATATTGTGAAGAAGAATCTCAGCATATTCTGGTGTATGAGTATATGCACAATGGCACTTTACGGGATCACATTCATGAGAGTTCCAAGAAGAAGAACTTGGACTGGTTAGCACGTCTTCGTATTGCAGAAGATGCAGCTAAAGGTATTGAATACTTACACACAGGATGCAATCCTAGTATAATTCACCGTGATATAAAGACAGGAAATATTCTCCTAGACATCAATATGAGAGCCAAAGTATCAGACTTTGGACTCTCTAGATTAGCCGAAGAAGATTTAACTCACATATCAAGCATTGCACGAGGAACTGTAGGCTATTTGGATCCTGAGTACTATGCAAGTCAACAATTAACAGAAAAAAGTGACGTGTACAGTTTTGGAGTTGTTCTGCTGGAACTGATATCTGGAAGAAAGCCTGTGTCATCTGAAGATTACAGTTCCGAAATGAACATTGTTCATTGGGCAAGATCCTTAACCCGAAAGGGAGATGCAATGAGCATCATTGAGCCTTCTCTAGCTGGGAATGCCAAAAGTGAGTCCATTTGGAGGGTGGTTGAAATTGCCATGCAATGTGTAGAACAACATGGTGCCTCTAGGCCAAGGATGCAAGAAATCATTTTGGCTATACAAGATGCTATAAAGATTGAAAAAGGAACAGAAAATAAGCTAAAatcaccatcatcatcatcatTTTCAGCTAGTAGTAGTTCAAAGCCACATTCTACACGAAAAACTTTACTCACAAGCTTTCTTGAAATTGAGAGCCCTGACGTGTCAAATGGTTGCCTCCCATCAGTAAGATAA 2808 0.3925 MALSSLFLVLIPFLTSFAVSQLEEFVSIDCGGTSNYTDSKTGLAWISDSGIMQHGISVEVESPNGSMVQYQRRRDFSIDSKKYCYTLSTEERRRYLVRATFQYGSLDSGDTYPQFQLFLDATKWATVSIYDASRIYVKEMIIRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEDNFFLEVAARINFGAPTEDAVRYPDDPYDRIWDSDLIRRQNYLVGVAPGTERISTTRDIDVDTREYPPVKVMKTAVVGTRGVLSYRLNLEDFPANARAYAYFAEIEDLGKNESRKFKLKQPYIADYSNAVVNIAENSNGSYTLYEPSYMNVTLEFVLSFSFVMTPDSTRGPLLNALEISKYVQIASKTDKQDTMVVKAFRFFSSESSQTNEGDPCVPTPWEWVNCSATTPPRITKIILSRRNVKGEIPPELSNMESLTELWLDGNLLTGSLPDMSKLINLKIVHLENNKLSGRLPSYLGSLPSLQALFIQNNSFSGEIPARLVSDKIIFNFEGNPGLYRGNKKHFKLVVGISIGVLVILLILFLVSLILLLNTRRNASQKKREEKGISGRTNSKPLTGYSFLRGGSLMDESTTCHITLSELKEATDNFSEKIGKGSFGTVYYGKMRDGKEIAVKSMSESSCNGNQQFVNEVALLSRIHHRNLVPLIGYCEEESQHILVYEYMHNGTLRDHIHESSKKKNLDWLARLRIAEDAAKGIEYLHTGCNPSIIHRDIKTGNILLDINMRAKVSDFGLSRLAEEDLTHISSIARGTVGYLDPEYYASQQLTEKSDVYSFGVVLLELISGRKPVSSEDYSSEMNIVHWARSLTRKGDAMSIIEPSLAGNAKSESIWRVVEIAMQCVEQHGASRPRMQEIILAIQDAIKIEKGTENKLKSPSSSSFSASSSSKPHSTRKTLLTSFLEIESPDVSNGCLPSVR 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01741 935 Pfam Malectin-like domain 28 361 IPR024788 -
Cca09g01741 935 Gene3D Transferase(Phosphotransferase) domain 1 683 901 - -
Cca09g01741 935 Pfam Protein tyrosine and serine/threonine kinase 609 874 IPR001245 GO:0004672|GO:0006468
Cca09g01741 935 PANTHER - 12 905 - -
Cca09g01741 935 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Cca09g01741 935 PANTHER OS07G0107800 PROTEIN-RELATED 12 905 - -
Cca09g01741 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Cca09g01741 935 Gene3D Phosphorylase Kinase; domain 1 587 682 - -
Cca09g01741 935 MobiDBLite consensus disorder prediction 887 910 - -
Cca09g01741 935 SMART serkin_6 607 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01741 935 ProSiteProfiles Protein kinase domain profile. 607 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01741 935 SUPERFAMILY Protein kinase-like (PK-like) 593 874 IPR011009 -
Cca09g01741 935 ProSiteProfiles Leucine-rich repeat profile. 437 459 IPR001611 GO:0005515
Cca09g01741 935 SUPERFAMILY L domain-like 397 503 - -
Cca09g01741 935 Gene3D Ribonuclease Inhibitor 369 515 IPR032675 -
Cca09g01741 935 MobiDBLite consensus disorder prediction 890 910 - -
Cca09g01741 935 CDD STKc_IRAK 613 874 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01741 Cca-Chr9 41915559 41921366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01741 13 935 Receptor kinase-like Gene Family AT1G67720 67.495 0.0 1276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Cca09g01741 Malectin_like 3.3e-88 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01741 - - gmx:100790944 1676.37