Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01710 ATGAGGAACACTTGCAACTTGGAACTTTGCCTTTTCCCTCCCTCCATCTCCCATCTTCGCCCCTTAATGGAAGCAGAAGCGAGTGAGAGCCCACAACAACAGGAGCCTCAGCGACCACACCAATATCATCCCTTCACTGTTTTCTATGACGGCAAGATTTGCGTTTCAGATGTCACCGAGTTTCAGGCCAGATCCATTCTGATGGTAGCGAACAAGGAGATGGAGAGAAGAGTGATGACACCAACTGGTTCAGAACCATCTTCTCCAATGCTGCAATCACCCCATAACATCTATAGCCCTTCCTCTGGACTTTCCATGAAAAGGTCGCTGCAGAGATTTCTCCAGAAGAGGAAGAATCGAGTCCAAGAAACATCACCATACAGTCACTAG 390 0.4795 MRNTCNLELCLFPPSISHLRPLMEAEASESPQQQEPQRPHQYHPFTVFYDGKICVSDVTEFQARSILMVANKEMERRVMTPTGSEPSSPMLQSPHNIYSPSSGLSMKRSLQRFLQKRKNRVQETSPYSH 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01710 129 MobiDBLite consensus disorder prediction 78 110 - -
Cca09g01710 129 Pfam Jas motif 107 128 IPR018467 -
Cca09g01710 129 PANTHER - 1 129 - -
Cca09g01710 129 Pfam tify domain 44 71 IPR010399 -
Cca09g01710 129 MobiDBLite consensus disorder prediction 81 109 - -
Cca09g01710 129 ProSiteProfiles Tify domain profile. 38 72 IPR010399 -
Cca09g01710 129 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 129 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01710 Cca-Chr9 41432692 41435146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01710 1 127 Tify Gene Family AT1G30135 43.609 1.46e-24 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Cca09g01710 tify 4.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01710 - - gmx:100305565 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01710 09 41432692 41435146 Cca09g01710 09 41432692 41435146 ECH