Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01703 ATGAAGAGGGAGCACGAGCAGTTAGGGTCGAACGGAGGGAGCTCGAGCGGAAAGTCGAACCTTTGGGGGGAGGAGGACGGAGGGATGGACGAGCTGCTGGCGGTGGTGGGTTACAAGGTGAGGTCATCAGACATGGCGGAAGTGGCGCAGAAGCTGGAGCGTCTGGAGGAAGCCATGGGAAACGTTCAAGAGGGAATCTCAGACCTTTCAAACGACGTCGTTCACTACAACCCCTCCGACATCTCCAACTGGCTGGAAACCATACTCTCCAATTTCGACACCCTGTCTCCGGAGGACCCGGAGAAGGACTCCGCCTCCTCTGACTACGACCTAAAGGCTATTCCAGGGAAGGCAATCTACGCACCCACGCCGCTGCCGCAACAACCTAACCCTAGCAAGCGCCTCAAACCCTCCGAGTCAACGCGCGCGCTTCTCCTCGTTGACTCCCAGGAGAACGGGATCCGCCTCGTCCACACCATGATGGCCTGCGCGGAGGCCGTCGGGACAAACAACCTCGCCGTCGCGGAGGCGCTCGTCAAGCAGATCGGCTTCCTCGCGGTGTCGCAGGTCGGCGCCATGCGGAAGGTCGCCACCTACTTCGCGGAGGCTCTGGCGCGGCGAATCTACGGCGTCTTCCCGCCCCACCACGCGCTCTCCGACGCACTCCAGATTCATTTCTACGAGACCTGTCCGTACCTCAAGTTCGCGCACTTCACCGCGAATCAGGCGATTCTTGAAGCTTTCCAAGGGAAAAGCCGCGTCCACGTCATCGATTTCGGAATCAACCAGGGGATGCAGTGGCCGGCGCTGATGCAGGCGCTCGCGCTCCGTCCCGGCGGTCCTCCCGTCTTCCGCCTCACCGGAATCGGACCTCCCGCCGCGGACAACTCCGACCACCTCCAGGAGGTCGGGTGGAAGCTCGCGCAGCTCGCGGACACGATCCACGTGCAGTTCGAGTACCGCGGATTCGTCGCCAACAGCCTGGCGGATCTCGACGCCTCCATGCTGGAACTCCGTGAAGAGGAGTCCGTGGCCGTGAACTCCGTGTTCGAGTTTCACAAGCTCCTGGCTCGGCCCGGGGCGGTGGAGAAGGTTCTCTCGGTGGTGCGGCAGATTCGTCCGAAGATTCTGACCGTGGTGGAGCAGGAAGCGAGCCACAACGGATCGAGTTTTGTGGACCGATTCACGGAGTCGCTGCACTATTACTCCACTTTGTTCGATTCGCTGGAAGGTTCCCCTGTGAACCCGCAGGACAAGGCGATGTCGGAGGTTTATTTAGGGAGGCAAATCTGTAACGTGGTGGCGTGTGAGGGAGTGGAGCGCGTGGAGCGGCATGAGACGCTGAACCAGTGGCGGAACCGGTTCAGTTCGGCCGGCTTTTCTCCGGTGTATTTGGGCTCCAACGCTTTCAAGCAAGCCAGCACGTTGCTCGCGCTGTTTGCGGGTGGGGATGGGTATAGGGTGGAAGAGAACAGTGGCTCTCTCATGCTCGGTTGGCACACTAGGCCCTTGATTGCTACCTCCGCGTGGCAACTCGCTGCGAATTCGCTGTTTCCTCACTGA 1563 0.6072 MKREHEQLGSNGGSSSGKSNLWGEEDGGMDELLAVVGYKVRSSDMAEVAQKLERLEEAMGNVQEGISDLSNDVVHYNPSDISNWLETILSNFDTLSPEDPEKDSASSDYDLKAIPGKAIYAPTPLPQQPNPSKRLKPSESTRALLLVDSQENGIRLVHTMMACAEAVGTNNLAVAEALVKQIGFLAVSQVGAMRKVATYFAEALARRIYGVFPPHHALSDALQIHFYETCPYLKFAHFTANQAILEAFQGKSRVHVIDFGINQGMQWPALMQALALRPGGPPVFRLTGIGPPAADNSDHLQEVGWKLAQLADTIHVQFEYRGFVANSLADLDASMLELREEESVAVNSVFEFHKLLARPGAVEKVLSVVRQIRPKILTVVEQEASHNGSSFVDRFTESLHYYSTLFDSLEGSPVNPQDKAMSEVYLGRQICNVVACEGVERVERHETLNQWRNRFSSAGFSPVYLGSNAFKQASTLLALFAGGDGYRVEENSGSLMLGWHTRPLIATSAWQLAANSLFPH 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01703 520 MobiDBLite consensus disorder prediction 1 25 - -
Cca09g01703 520 SMART DELLA_2 30 102 - -
Cca09g01703 520 PANTHER DELLA PROTEIN GAI1-RELATED 10 116 IPR030006 GO:0003712|GO:0005634
Cca09g01703 520 PANTHER DELLA PROTEIN GAI1-RELATED 141 512 IPR030006 GO:0003712|GO:0005634
Cca09g01703 520 Gene3D - 28 92 IPR038088 -
Cca09g01703 520 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 116 IPR005202 -
Cca09g01703 520 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 141 512 IPR005202 -
Cca09g01703 520 Pfam Transcriptional regulator DELLA protein N terminal 30 94 IPR021914 -
Cca09g01703 520 Coils Coil 45 72 - -
Cca09g01703 520 Pfam GRAS domain family 156 511 IPR005202 -
Cca09g01703 520 ProSiteProfiles GRAS family profile. 147 511 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01703 Cca-Chr9 41312545 41315242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01703 18 515 GRAS Transcription Factor Family AT1G14920 68.053 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Cca09g01703 GRAS 2.5e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01703 K14494 - gmx:547718 872.848