Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01700 ATGTCAGAGATTTGGCATCTTGTGAAGAAATCACTTCATTGCAAACCTCAGTCATCAGAAGTTCATGATCCGAAGGCAAGTAGAGGTACTCATCAGAGAAAAAAAATAGACCAGATTGACAGTTCAAATGAGGAAAACCAGAGACACTCAGAGAGACGTGTTAGCCATGAAGTTTTCCTTGATAGATCAAGCGGTGAGATTATGATTTGTCCATGTTGTCCTTGTTCTCAAGGCCATGATCATGAAGATGGCAATAAGCCTCATCCTCCTAGATCAACCTGCTGCCAGCGAATTATATATTCATCTAAAGCATATTGTGTTGATTGTCATGTTTTCTCAAAGTCAAAGGTGCCACTGGAGAAAGATTGTTCCAGTGGTCCCCCATCGTCAATTCGTCATCATGAATGTGAAGAGAAACTACAATCTACTGACTTTGCTGAACAACATGATGATAATATCGCTGAACACTCAGTGATCCAACTTGAGAGAGAAAGCTCATCTTGCAAGATCATCGAACAAATATGCCAAGGTAGCGACATGAATTCCGAAAGCAAGATTGAATGTGTGTTGAGAGTGGAGAACAAGAAGGAAACCTTTGCTTGCTTCGAGGAATGTAGAGAAATGGTAAGGGTGAAAGCTGAAAGGGTCCAAAACGATCACCCACGATGTTTGGTCGATGGAAACGAGTTATTGAGATTTCATGGCACAACCATTGCATGCTCCCTCGGCTCGAATGCCTCTTCTACCCTTTGCACTTTAGATGAATGTGGCGTGTGCCAAATTCTGAGGCATGGTTTCTCCGCCAACCAAGAATTTCATGGTTCACTTGGGGTTTACACCACTTCCACTAGTGCAAAAGCCATTGATTCCATTTGCATCACACCCAATAATAATTTTGTCATGAGAAAGTCTGTTATGGTGTGCAAAGTGATAGCTGGGAAGATCTATAATCCTCTTCAAGAGATCAAGGAAATGACCGATCCTGGGTTTGATTCTTTGGTCAAGAAAATACTTGACCAATCAGAGATTGAAGAACTCATTGTTTTAAATCCTAGAGCTGTGCTCCCTTGCTTTTTGGTAATCTACAATTTCTGA 1095 0.4137 MSEIWHLVKKSLHCKPQSSEVHDPKASRGTHQRKKIDQIDSSNEENQRHSERRVSHEVFLDRSSGEIMICPCCPCSQGHDHEDGNKPHPPRSTCCQRIIYSSKAYCVDCHVFSKSKVPLEKDCSSGPPSSIRHHECEEKLQSTDFAEQHDDNIAEHSVIQLERESSSCKIIEQICQGSDMNSESKIECVLRVENKKETFACFEECREMVRVKAERVQNDHPRCLVDGNELLRFHGTTIACSLGSNASSTLCTLDECGVCQILRHGFSANQEFHGSLGVYTTSTSAKAIDSICITPNNNFVMRKSVMVCKVIAGKIYNPLQEIKEMTDPGFDSLVKKILDQSEIEELIVLNPRAVLPCFLVIYNF 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01700 364 Gene3D - 147 363 - -
Cca09g01700 364 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 363 - -
Cca09g01700 364 MobiDBLite consensus disorder prediction 15 55 - -
Cca09g01700 364 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 363 - -
Cca09g01700 364 SUPERFAMILY ADP-ribosylation 158 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01700 Cca-Chr9 41248995 41252598 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01700 120 361 C2H2 Transcription Factor Family AT5G54630 44.048 4.37e-68 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01700 - - gmx:102660699 504.597