Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01694 ATggacaaggacaaggacaaggacaagTCTCATAGTCACAGTTTTCTTCACAGTATCGTCAAACACTTCAAATTCGGTTCCAGTAAAGAGCGAGACAATGAAGCTGATATACAGAAAATGGCTGCACAGGAGCAGAAGATCTTCGCCTACGAAACCTTGGCTGCTGCCACAAAAAACTTTAGTGCTATTCATAAGCTAGGCGAGGGAGGTTTTGGACCTGTTTACAAGGGGAAGCTGAATGATGGGAGAGAGATTGCTGTGAAGAAGCTATCACACACTTCAAATCAAGGGAAGAAGGAGTTCATGAATGAGGCCAAGTTGTTGGCTCGTGTGCAGCATCGGAATGTGGTCAATTTGGTGGGCTATTGTGTCCATGGCACCGAGAAACTACTTGTTTATGAGTACGTTGCTCATGAGAGCCTTGACAAGCTTCTATTCAAATCACACAAGAGAGAAGAACTTGATTGGAAACGTAGGTTTGGCATAATCACAGGCGTGGCAAAGGGGTTGCTTTATCTTCACGAAGACTCACACAATTGCATCATCCATCGCGACATAAAGGCGAGTAACATCTTGCTTGATGACAAATGGACGCCCAAGATTGCAGATTTTGGCATGGCCCGTCTCTTCCCCGAAGATCAGAGCCAGGTCAATACACGTGTGGCGGGAACCAATGGGTACATGGCTCCGGAATATGTTATGCATGGAAACCTATCGGTGAAGGCAGACGTATTTAGTTATGGAGTTTTGGTATTGGAGTTGATCAGCGGCCAACGAAACTCGTCTTTCAATTTGGATGTGGACGCGCAGAATCTCCTTGATTGGGTAATACTCTTCACTCATTTCTCATCAAAGGACTTAGGTAGTACAGTCACCCAATATCTTTTAGTATTTTTGTATAAAAAAATGTCCCATTCACATTTCCATTACTTTTTGAAGCCTTAA 945 0.4254 MDKDKDKDKSHSHSFLHSIVKHFKFGSSKERDNEADIQKMAAQEQKIFAYETLAAATKNFSAIHKLGEGGFGPVYKGKLNDGREIAVKKLSHTSNQGKKEFMNEAKLLARVQHRNVVNLVGYCVHGTEKLLVYEYVAHESLDKLLFKSHKREELDWKRRFGIITGVAKGLLYLHEDSHNCIIHRDIKASNILLDDKWTPKIADFGMARLFPEDQSQVNTRVAGTNGYMAPEYVMHGNLSVKADVFSYGVLVLELISGQRNSSFNLDVDAQNLLDWVILFTHFSSKDLGSTVTQYLLVFLYKKMSHSHFHYFLKP 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01694 314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Cca09g01694 314 Gene3D Phosphorylase Kinase; domain 1 21 135 - -
Cca09g01694 314 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 277 - -
Cca09g01694 314 Pfam Protein tyrosine and serine/threonine kinase 63 258 IPR001245 GO:0004672|GO:0006468
Cca09g01694 314 Gene3D Transferase(Phosphotransferase) domain 1 137 304 - -
Cca09g01694 314 SMART serkin_6 60 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01694 314 ProSiteProfiles Protein kinase domain profile. 60 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01694 314 PANTHER RECEPTOR-LIKE KINASE 11 277 - -
Cca09g01694 314 SUPERFAMILY Protein kinase-like (PK-like) 41 268 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01694 Cca-Chr9 41159175 41164405 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01694 48 273 Receptor kinase-like Gene Family AT4G11530 59.649 7.15e-93 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca09g01694 PK_Tyr_Ser-Thr 3.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01694 - - gmx:100795769 524.628