Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01688 ATGCTATGCAACTTACGTGGTTTTACCCAGTTACTTGCATTTCAAATTCTACATAAACTGTTTCCTTCGTTGAATTATGGGTCTTCTGAGATGCTACCTTTAGAGAAGAGGTGCTTTGTGGATTTGAAAACATACCTTGCAAGAAACTCTGATTGTGCGCGCTTACGAACATCAATGGAAGGATATCTTGATGCTTATGACCCAAATAGTTCTGTCACACCGGCTGGAATTTTCATCAATCGAGTTGAGCGTTCGAGTGGCAAATCAGTTGAATTGACTTCAGAAACCGGAACACTGTTTGTTTTCTTCACTGGTGGAATTGTGTTTTTAACACTTATAGTAAATGGTTCAACCACACAATTCATTTTACACTACCTTGGCATGGATAAATTATCAGCAGCTAAGAGACGTATCCTCGACTTCACAAAGTATGAAATGTTGAACAAGGCATTGGAGGCTTTTGGGGAACTTGGAGATGATGAGGAACTTGGGCCTGTTGACTGGCCCACAGTGAAGAGATATATCTCCTGCTTAAATGACATTGAAGGTGAACGTGTTCACCCTCATGGTGCACTTGAAAGTGATAGTAACCTAGATCCTATGAACTTGAAAGACATAAGAGTACGCCATCTGAATGGTGTACAAGCTGCTTATTGGGAGATGCTTGATGAGGGAAGAATTTCTCAAACAACAGCTAATATCCTTATGCTTTCCGTAGAGGAAGCAATAGATTTGGCTTCATCTGAGCCTCTATGTGACTGGAGAGGTTTAAAAGCTAACGTTCATTTCCCGAATTACTACAAGTTTCTCCAGTCCAGTATATTCCCACCGAAGTTAATCACATACTTCACTGTGGAAAGGTTGGAATCTGCATGTTATATTTGTGCTGCATTTCTTCGAGCTCACAGAATTGCTCGACAACAATTACATGACTTCATAGGTGACAGTGATGTTGCTTCTGCTGTCATCAATGAAAGTGTTGTAGAAGGAGAAGAAGCACGTAAGTTCCTAGAAGATGTTAATTTAACATACCCACAGGTTTTGCGTGTTGTAAAAACAAGGCAAGCAACATATGCAGTGCTAAATCATTTAATTGAATATGTTCAAAACCTTGAGAAGGCTGGGATATTGGAAGAGAAAGAGATGCTACAACTCCATGATGCTGTCCAGACTGATTTAAAGAAATTACTTAGAAATCCTCCCTTGGTTAAGCTTCCTAAAATAAGTAATATACATCCTATGTTGGGTGCTCTCCCATCTTCAGTTAGTGAATCACTTTCAACCTCTACCAAGGAAACGATGAAATTGCGTGGTTTGACACTTTACAAGGAAGGTGCCAAGTCTAATGGTATTTGGTTAATTTCTAATGGAGTGGTGAAGTGGAAAAGCAAGATGGTTAGCACCAAGCACTCCTTTTATCCTACTTTTACGCATGGGAGCACATTGGGTCTTTATGAAGTGCTGACTGGAAGACCATATATCTGTGATGTCATCACAGATTCCGTGATATTCTGCATTTTTCTTGAAGCTGAAAAGATAAGATCATGTCTCAAATCAGATCCTTCAACGGAAAAATTCCTATGGGAGGTATGGTTACATTAA 1602 0.3964 MLCNLRGFTQLLAFQILHKLFPSLNYGSSEMLPLEKRCFVDLKTYLARNSDCARLRTSMEGYLDAYDPNSSVTPAGIFINRVERSSGKSVELTSETGTLFVFFTGGIVFLTLIVNGSTTQFILHYLGMDKLSAAKRRILDFTKYEMLNKALEAFGELGDDEELGPVDWPTVKRYISCLNDIEGERVHPHGALESDSNLDPMNLKDIRVRHLNGVQAAYWEMLDEGRISQTTANILMLSVEEAIDLASSEPLCDWRGLKANVHFPNYYKFLQSSIFPPKLITYFTVERLESACYICAAFLRAHRIARQQLHDFIGDSDVASAVINESVVEGEEARKFLEDVNLTYPQVLRVVKTRQATYAVLNHLIEYVQNLEKAGILEEKEMLQLHDAVQTDLKKLLRNPPLVKLPKISNIHPMLGALPSSVSESLSTSTKETMKLRGLTLYKEGAKSNGIWLISNGVVKWKSKMVSTKHSFYPTFTHGSTLGLYEVLTGRPYICDVITDSVIFCIFLEAEKIRSCLKSDPSTEKFLWEVWLH 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01688 533 ProSiteProfiles cAMP/cGMP binding motif profile. 414 533 IPR000595 -
Cca09g01688 533 PANTHER - 95 530 - -
Cca09g01688 533 PANTHER SODIUM/HYDROGEN EXCHANGER 95 530 IPR018422 GO:0006812|GO:0015299|GO:0016021
Cca09g01688 533 SUPERFAMILY cAMP-binding domain-like 412 527 IPR018490 -
Cca09g01688 533 Gene3D Jelly Rolls 407 533 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01688 Cca-Chr9 41028599 41043085 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01688 82 529 Antiporters AT2G01980 67.478 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01688 - - ccaj:109804717 882.863