Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01678 ATGACTCCTGGTTTGTTGCAAGAAGCATCCATGACTATGGGCAACCTCAAAACCAACAGCATGACCTCTTTCCTTATCCTACTATCCCTCCAACACATCACCTCCTACACTCCACCAGATAATTTCGCCATCAACTGCGGTTCCACCATCTCACAAACTTCCCCAGATAATCGCAACTGGACCGCAGACACCACACCACTCTCAATAACCCTTCAACGCTTCAACCACCCTTCACTCAACAACACACTCATCCCTTTCACCACCTCGCTCTTCTCACGCTCCCAATTCTCCTACACCTTCCCCCTCACCCAAGGCCCAAAGCTTCTCCGCCTTTACTTTTACCCTACTTCATACCCCGCCTTCCCTCGCCATTACTCTCTCTTCTCCGTCAAAGCCAACCACCACACCCTCCTCAACCATTTCAACGCTTCACTCCATGCAGACAATCATGCTTACCCCTCACCAACATTCACAACACAACATTACATCAACGTGGAACCCAACCACCGTTTAAACATAACCTTCATTCCTAGCTCCACCGCTCATCCCAAAGCCTACGCCTTCATCAACGCCATCGAGGTTTTATCCATCCCAAACCATCTTTATCAAACACTCACCAGTGCTACTTTCAAGACAGTGCACAGAATCAACCTAGGAGTCAACAAAAACCACCTGGGAAGTACTTCCAAGCCCTCACAACCTCCTACACCACCCAAAACAGCAAAGAAAAACAATATTCAAATTCCAATAATAGCCTCTGTCGTGGCTGCGTCGTTACTCGTGTTATCATTCATCGGATTCATAATCTTCCGATGTGTAAGAAGAAGAGTTGGTATCGCGAGAGATGGGAACCCGGGTTCTTCAAGCACGCGCTGCCGCGAGTTCTCTTTGGCGGAGATAAGAGCCgcgacgagcaacttcgacgagggtttgatcgtgggaaaaggagggttcgggaacgtgtacaaaggaaacctaaacacgtgcgagaagcccgtggcgataaagcgtctgaaaccgggttcggagcagggcgcgcacgagttcgaaaccgagatcaagatgctgtcgcggtttcgccacgccaacttggtgtccctcatcggtttctgcaacgacggcggcgaaatgatcctggtgtacgacttcatgacgcgtgggaccctccgcgatcacctctacggctcctccggcgggctgtcgtgggagcggcggctgaagatctgcgtggaggcggcgcgtgggctgcagttcctccacggcggcgtggacaagcagagcgtgatccaccgcgacgtgaagagcacgaacattttacttgacgaggattgggtggcgaaggtgtcggatttcgggttatcgaaggtggggccgaacgcgtcgcacgtgacgacggacgtgaagggtagcttcgggtatttggatcccgagtactacatgagtctctggctgactcagaagtctgacgtgtactccttcggcgtggttttgcttgaggtgttgtgtgcgagggcccccatcgaGAGTACCGTGGACAAGCACCAGGGGTTCTTGGTGGCGTGGGTTAGAAGGTGCTATCATGATGGGAATGTTCATCAGACGGTGGATCCCGCTCTCAAGGGGGCCATTAGTCCCAAGTGTTTGAAGAAGTTTGTGGGGATTGCGTTGAGTTGTTTGAACGATCATGGCAAGGAACGGCCCTTGATGAAGGACGTGGTCAAGGGGTTGGAGCATGCGTTGACTTTGCAACGCTGTTATTCTCATGGTCGAGGTGGGGCCCTTAAGGAGAAGAGTGAGGAAGTAGCAATTGACTTGACCAAAATTCATTATGGTAAAATGGACGAGAGATTTGGTGAAGTCATGCACGCGTCTAGCAGCGGCAAGCCTACCACGAATTGCAGTGAGGAGGAGCAAGCTTTGGTGCATGAGGTGTTCCAAACAGCACGGTAA 1950 0.3359 MTPGLLQEASMTMGNLKTNSMTSFLILLSLQHITSYTPPDNFAINCGSTISQTSPDNRNWTADTTPLSITLQRFNHPSLNNTLIPFTTSLFSRSQFSYTFPLTQGPKLLRLYFYPTSYPAFPRHYSLFSVKANHHTLLNHFNASLHADNHAYPSPTFTTQHYINVEPNHRLNITFIPSSTAHPKAYAFINAIEVLSIPNHLYQTLTSATFKTVHRINLGVNKNHLGSTSKPSQPPTPPKTAKKNNIQIPIIASVVAASLLVLSFIGFIIFRCVRRRVGIARDGNPGSSSTRCREFSLAEIRAATSNFDEGLIVGKGGFGNVYKGNLNTCEKPVAIKRLKPGSEQGAHEFETEIKMLSRFRHANLVSLIGFCNDGGEMILVYDFMTRGTLRDHLYGSSGGLSWERRLKICVEAARGLQFLHGGVDKQSVIHRDVKSTNILLDEDWVAKVSDFGLSKVGPNASHVTTDVKGSFGYLDPEYYMSLWLTQKSDVYSFGVVLLEVLCARAPIESTVDKHQGFLVAWVRRCYHDGNVHQTVDPALKGAISPKCLKKFVGIALSCLNDHGKERPLMKDVVKGLEHALTLQRCYSHGRGGALKEKSEEVAIDLTKIHYGKMDERFGEVMHASSSGKPTTNCSEEEQALVHEVFQTAR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01678 649 PANTHER OS07G0166700 PROTEIN 35 220 IPR045272 GO:0004714|GO:0006468
Cca09g01678 649 PANTHER OS07G0166700 PROTEIN 239 609 IPR045272 GO:0004714|GO:0006468
Cca09g01678 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Cca09g01678 649 CDD STKc_IRAK 313 577 - -
Cca09g01678 649 SUPERFAMILY Protein kinase-like (PK-like) 290 574 IPR011009 -
Cca09g01678 649 ProSiteProfiles Protein kinase domain profile. 307 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01678 649 Gene3D Phosphorylase Kinase; domain 1 291 383 - -
Cca09g01678 649 MobiDBLite consensus disorder prediction 221 241 - -
Cca09g01678 649 ProSitePatterns Protein kinases ATP-binding region signature. 313 336 IPR017441 GO:0005524
Cca09g01678 649 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 35 220 - -
Cca09g01678 649 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 239 609 - -
Cca09g01678 649 Pfam Malectin-like domain 44 224 IPR024788 -
Cca09g01678 649 Gene3D - 41 197 - -
Cca09g01678 649 Gene3D Transferase(Phosphotransferase) domain 1 384 589 - -
Cca09g01678 649 SMART serkin_6 307 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01678 649 Pfam Protein tyrosine and serine/threonine kinase 313 575 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01678 Cca-Chr9 40824214 40826449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01678 228 627 Receptor kinase-like Gene Family AT3G51550 47.297 3.13e-116 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Cca09g01678 PK_Tyr_Ser-Thr 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01678 - - ccaj:109805163 1290.79