Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01659 ATGGTTTTTCCAAAACCTCCTTCTGAATCTGACCTCTTTCTTCATTCCAATTTTGCTTCTCGTTATGCCACCGACTCTCTTCCCAGGTGGTGCATGCCCGAGAACTCCATGCCTAAGGAGGCTGCCTACCAGAACATTCACGATGAGTTGCAGCTTGATGCCATTCCAAAGCTTAACTTAGCTTCCTTTGTCACCACCTCCATGGAAGAAGAGTGCAACAAACTTATTATGGAATCGATCAACAAAAACTATGTCGACATGGACGAGTATCCTGCCACCACTGACCTTCACAATCGGTGCGTGAACATGATAGCACGTTTGTTCCATGCTGAAGTTGGAGAAAATGAGAATGCAATTGGAGCAGGAACTGTTGGATCATCAGAGGCCATAATGCTGGCAGGGCTTGCATTCAAGAAGAAGTGGCAGAACAAACGCAAGGCAGAGGGAAAGCCTTGTGATAAGCCCAATTTGGTCACTGGTTCCAATGTCCAGGTATGTTGGGAGAAGTTTGCAAGGTATTTTGAGGTGGAGTTAAGGGAAGTGGAGGTGAGGGAAGGGTACTACGTGATGGACCCTGCCAAAGCCGTTGAGCTGGTTGATGAGAACACTATTTGTGTGGCTGCAATCTTGGGTTCAACTTACAACGGAGAGTTCGAAGATGTGAAGCTCCTAAATGATCTACTTCTAGAGAAAAACAAGCAAACTGGATGGGATACACCTATTCATGTGGATGCTGCTAGTGGTGGCTTTATTGCTCCATTCCTTTATCCAGAACTAGAATGGGATTTCAGACTCCCATTGGTGAAGAGCATAAATGTTAGTGGCCACAAGTATGGTCTTGTTTATGCTGGAATTGGTTGGGTCATATGGAGGACCAAGGATGACTTGCCAGAAGACCTTGTCTTCCATATTAATTACCTTGGTGCTGACCAACCCACCTTCACCCTCAATTTCTCTAAAGGTTCTAGTCAGATAATTGCTCAATATTATCAGCTAATTCGCCTCGGCCAAGAGGGGTACCGTAGCATAATGGAGAACTGCAGAGAAAACGCAATGGTGGTGAAGAAACATTTGGAGAAGAGTGGACGGTTCCACATACTCTCAAAAGACAATGGTGTTCCAGTGGTGGCATTTTCCTTGAAAGACAGAAGCGAATTCGATGAGTACAAGATATCAGAGATGTTGCGGCGCCACGGTTGGATCGTGCCAGCATATCCAATGCCACCTGCGGCTCAGCACATCAATGTGCTTCGTGTGGTCATTAGAGCAGAGTTTTCACGTACCCTTGCTGAACGCCTTGTGTTTGACATACACAACGTGTTGCATGAACTCGAAAAAGAACATCCCCACAAAGTGATcaacaacaacaacaacaacaTTAAGGAAGAGAAGAAGGGGTTGGTTGATATTGGAGTGAAGAACACAAACACTGCATTGGATGCACACAGGGAAATCATTGCCCAAGAATCCAACAAGCGTCACAAAATCATGGCTGCGTAG 1500 0.4507 MVFPKPPSESDLFLHSNFASRYATDSLPRWCMPENSMPKEAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPATTDLHNRCVNMIARLFHAEVGENENAIGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPCDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVELVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKDDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMENCRENAMVVKKHLEKSGRFHILSKDNGVPVVAFSLKDRSEFDEYKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAERLVFDIHNVLHELEKEHPHKVINNNNNNIKEEKKGLVDIGVKNTNTALDAHREIIAQESNKRHKIMAA 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01659 499 SUPERFAMILY PLP-dependent transferases 16 447 IPR015424 -
Cca09g01659 499 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Cca09g01659 499 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Cca09g01659 499 Gene3D - 1 65 - -
Cca09g01659 499 PANTHER GLUTAMATE DECARBOXYLASE 1 498 - -
Cca09g01659 499 Gene3D - 361 448 - -
Cca09g01659 499 PANTHER GLUTAMATE DECARBOXYLASE 1 498 IPR010107 GO:0004351|GO:0006536|GO:0030170
Cca09g01659 499 CDD DOPA_deC_like 59 437 - -
Cca09g01659 499 Gene3D - 66 360 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01659 Cca-Chr9 40507430 40510046 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01659 1 487 Calmodulin-binding Proteins AT5G17330 74.538 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01659 K01580 - gmx:100782330 905.59