Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01642 ATGGCTCCCTTCTTGTATTACTCCCTCCTTGCTCTTGTTTTCATTCTCACGTTCAAGTTTGTCCTACAaagaagaagaagaagaggaagCAAAAACCTTCCACCATGTCCACCAACACTTCCCTTGATCGGAAACCTCCACATGCTGAAGTCCCCACTGCTCCACCGCTCCCTCCACAGTTTGTCACAAAAGTATGGCCACATCTTCTCTCTGTGGTTCGGTTCACGCTTTGTGGTCGTCATCTCCTCCCCAACCATGGTCCAAGAATGCTTCACCAAATACGACACCGTCCTCGCTAACCGCCCACAGTTCCTCACCGGAAAGTACCTCTTCTACAACTACACCAGCATGGGCTCCTCCTCCTACGGCGACCACTGGCGCAACCTCCGCCGCATCATCACCATCGACGTCCTCTCCACGCAACGCCTCAACTCCTTCTTCCACATCCGAAGGGAAGAGACCATGAGGGTCATCCAAAAGCTTGTCCATGAATCATGCAAGGGCTTCACCCAAGTCAAACTCAGACCCAGGCTTACGGAGATGACATTCAACAACATGATGAGAATGATATCTGGAAAAAGGTACTACGGCGATGACGTGGAGGCTGCGGATGCGGAGGAAGCGAAGCAGTTCAGAGACATAATATCGGAGATGATGATGTTGTTGGGCGCAAGCAACAAGGGAGACTTCGTGCCTCTGCTTAGGTTGTTCGATTTCGACGGTTTGGAGCAGAGGCTGAAGGCGATTAGCACGAGAGCAGATGCGTTCTTGCAGGGTCTCCTTCAAGAGCATCGCAGTGGGAAGCACAAAGCCAACACCATGATCGAACATCTCTTGTCTTTGCAGAAATCTCAGCCTGAGTACTACTCCGATCATATTATCAAAGGCCTCATTCAGGGCATGCTCCTGGCGGGAACAGACACAACAGCCGTGAGTATAGAGTGGGCACTAGCTGCTTTATTAAATCAGCCAGAAATATTGAAGAAAGCAAAGGATGAAATAGACACTTACGTTGGACAAGATCGCTTGGTAGATGAGTCAGACATTCCAAATCTTCCTTATATTCAAAATATTGTCTACGAGACACTTCGATTATACACTCCAGCTCCATTACTATTGCCTCATTATTCCTCAGATGAGTGCACTATTGAAGGATACACTATTCCACGTGACACCATAGTGTTGATCAATGCATGGGCCATTCAAAGAGATCCTCAACTTTGGAATGATGCTGAATCCTTTAAGCCAGAGAGGTTTGAGAAGGAAGGAGAAGTAAACAAATTAATGTCATTCGGATTGGGAAGACGGGCTTGTCCAGGATTAGGTTTGGCACATCGTTCAATGGGATTGACTTTGGGATTGTTGATTCAATGTTTTGAATGGAAACGAACAAGTGATGAAGAAATTGATATGAATGAGAATAAAGGGGTGGCAATGCCGAAGATAATTCCACTAGAAGCTATGTGCAGAGCACGTCCAATCAGCCACAAAGTTATGCATGAATTTGTTGTTTAG 1515 0.462 MAPFLYYSLLALVFILTFKFVLQRRRRRGSKNLPPCPPTLPLIGNLHMLKSPLLHRSLHSLSQKYGHIFSLWFGSRFVVVISSPTMVQECFTKYDTVLANRPQFLTGKYLFYNYTSMGSSSYGDHWRNLRRIITIDVLSTQRLNSFFHIRREETMRVIQKLVHESCKGFTQVKLRPRLTEMTFNNMMRMISGKRYYGDDVEAADAEEAKQFRDIISEMMMLLGASNKGDFVPLLRLFDFDGLEQRLKAISTRADAFLQGLLQEHRSGKHKANTMIEHLLSLQKSQPEYYSDHIIKGLIQGMLLAGTDTTAVSIEWALAALLNQPEILKKAKDEIDTYVGQDRLVDESDIPNLPYIQNIVYETLRLYTPAPLLLPHYSSDECTIEGYTIPRDTIVLINAWAIQRDPQLWNDAESFKPERFEKEGEVNKLMSFGLGRRACPGLGLAHRSMGLTLGLLIQCFEWKRTSDEEIDMNENKGVAMPKIIPLEAMCRARPISHKVMHEFVV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01642 504 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01642 504 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01642 504 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01642 504 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01642 504 PANTHER ISOFLAVONE 2'-HYDROXYLASE 3 492 - -
Cca09g01642 504 Gene3D Cytochrome P450 19 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01642 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Cca09g01642 504 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 492 - -
Cca09g01642 504 Pfam Cytochrome P450 34 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01642 504 SUPERFAMILY Cytochrome P450 34 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01642 504 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01642 504 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01642 504 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01642 504 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01642 504 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01642 504 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01642 504 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01642 504 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g01642 504 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01642 Cca-Chr9 40286273 40293666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01642 12 503 Cytochrome P450 AT4G37370 54.949 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01642 K13260 K22932 gmx:100784120 811.216