Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01611 ATGATGAAGGAAAACAAATCATCAACACCTAAAATGCTTAACAGGAACTGGCTTTCAAAGCGTAAGCGGAGAAAGCTTCCTTTAGGATTAGGACTAGATCAGTCCTCTAAAAAAGAGCAATCCAATGGTAAAGAAGAAAATTCAACTTCTGAATCTTCTAGAAATGCTTCAGCTAAACGTGTGCTGAAGACTGAAGTAGCTACTGATCAAATGTCATCTAAGAAGAAAGGAAATGATGGGTATTACTACGAATGTGTGATCTGTGATGTTGGTGGCAACTTATTGTGCTGTGATAGCTGTCCTCGCACTTATCATTTACAATGTCTTGATCCCCCTCTTAAGCGCATCCCTAATGGGAAGTGGCAATGCCCAAGATGCTTTGAAGGAAATGACCAACTAAAGCCCATAAACCACCTGGATCCAATTTCTAAACGAGCTAGGACAAAAGTTGTCACTGCAAAATCCAAAGGTCAAGTTAACTCGCTTAACCTTGAAAAAGTACCTGGACTTTTTGGAAGTAAACTTATTTCAAAGAAAAGGTCCTCAAGCAAAGGAAAATCTATTTCAGCAATGGGGATGAATTTCTTTGGGAAGAAACTGTCATCTTCTCCAGTAGATGAAACTTGTAGCAACAAACCTATTGACCCATCTCTTGAGAGTCCTATGGAAGGAACTTCATCATGTGCAGATGCTGATGAAAAGAAATTGAGCTTGTCCCCAACAGTCTCCCCTATGGACATGAAGTCAACTTCACCTGCTAAAGAAGTTTTGTCACTCTCTAAAATTACTAACTTAGAAGAAAATGAAGACCTGGAGGGGAAGTCTGATTTATCTTGCAATAAAATTCCTTCAAGAAAAACGCTTGTTCTTGCTATTGCTGCTAGCGGAGAGGAAGTGAGAAAAAGGAAGAATAAAGTTGTTAATGATAATACTAGTCAAAAGAAGCAAAGGACTGAAAAGGGGAAAAAAATTGTCAATCCTTCTATAAAGTCCAAGTCAGGGAATAATAAAGTACACAAGCAGAAATCTATAACCCATAGTGTTTCTGCATCTGTATCAAAAAAGGATGTTGGAAACAAGAATTCTTATGCCCAGCAGAAAGATGAGAAGTTCCCTAAGGTAATGAAAGACACATCAAATGAACCTGATAAAGCACGAAGTCTTGTGGATGAAACATTAATGCATGAAGACAGTGCTATTGCCGAGTCTCTGCAGGTTGATCGGGTTCTAGGGTGTCGAATTCAAGATGAAAATGCAAATTCATTGCGTCCCTTGTCTTTGAATGCTGCAGATGACTCAACTTCTGGTGATCTGTTAACATCAGAAAACCAGACCAGAGTACTAGAGGATAATTCTGCTTTTGCTAATGATCTGGATATTGAGTCAACTGAAAATCTTGTTGATGATCATCAAAATGTTGTCAAGAGTTCTGATGAAGAAAGAACATTGGATAACACTAATAGAGTGGAAAGGATTCATGTATACAGAAGATCTATAGCTAAAGAAAGTAAGAAAGGAAATCCTGTAGATTCATTAAGTAAAGACACTGATGATTTGGGTTCCTGTGCCAGGGAAGGTAAAGATCAGGATGATTCTGCTGTATCTGCTGAACAGTTGGAAAAATCAAATGACAAGATGGAGACAGAAGAGAGCATTAATGTTGCTTTAAGAAGTGAGGATAACAGTGAGCTTCAAAAAAATTGTGAAATACATGTCTCTCCTGAAACAAAACAAAAAGAAATGAATGCAGAGAAGGGAATGGGTGACAGTATTGATAATAAAGCTCAAGATGGTAACATAATTGAATGCACAGGTCCAAATGGAGAGAAAGTTTTCTATGAATTTTTAGTTAAATGGGTAGGAAAGTCTCATATTCATAATAGTTGGATTTCTGAGTCCCAGTTAAAAGTTCTTGCAAAGAGAAAACTAGAAAATTACAAGGCAAAGTATGGGATGGCGATAATTAATATTTGTGAGGAGCGTTGGAAGCAGCCTCAGCGGGTGCTTGCCCTTCGAACTTCCAACCATGGAACATCTGAAGCATTTGTAAAATGGACTGGACTGCCTTATGATGAATGTACTTGGGAAAGTTTAGATGAACCAGTGCTTCAAGATTCTTCTCATTTGATTACAGTTTTCAATAAGCTTGAAACCCTCACGCTGGAAAGGGATTCATCAAAGGAAAATTCAACTAGAAAAAGCAATGATCATCAAATTGATATATTTAATCTTACCGAGCAACCTAAGGATCTAAAAGGTGGTTCTTTGTTTCCCCATCAGCTCGAGGCTTTGAACTGGTTGCGAAAATGTTGGTATAAGTCAAAAAATGTGATACTTGCTGATGAGATGGGGCTTGGGAAAACAGTATCTGCTTGTGCTTTTCTTTCATCATTGTATTTTGAATTCAAAGTTTCACTTCCTTGCTTGGTCTTGGTACCGCTTTCTACAATGCCTAATTGGCTTGCTGAATTTGCACTATGGGCCCCAGATGTGAATGTTGTAGAATATCATGGCTGTGCTAAAGCAAGAGCCATAATTCGCCAGTATGAATGGCATGCAAATGATCCAAGTGGATTGAATAAGAAAACAGAAGCCTATAAGTTTAATGTGCTTTTAACTACATATGAAATGGTTCTTGCTGATTCTTCTCATTTGCGTGGAGTTCCTTGGGAAGTTCTTGTTGTTGATGAAGGCCATCGACTAAAGAATTCTGAAAGTAAGCTTTTCAGTTTGCTAAATACATTCTCCTTTCAACACCGTGTACTATTGACAGGTACCCCTCTCCAGAACAACCTTGGTGAGATGTACAACTTGCTTAATTTCTTGCAGCCAGCTTCGTTTCCTTCTCTATCTTCATTTGAGGAGAAATTTAATGATCTTACGACTGCAGAGAAAGTTGATGAATTGAAAAAACTTGTTGCTCCTCACATGCTTCGTAGACTTAAAAAGGATGCCATGCAAAATATCCCCCCTAAGACAGAAAGAATGGTTCCTGTTGAGTTGTCATCCATCCAAGCTGAATATTATCGTGCAATGCTTACAAAGAATTATCAAATATTGCGGAATATTGGGAAAGGGGTTGCCCAGCAATCTATGCTGAACATTGTGATGCAACTGAGGAAGGTCTGTAATCATCCATACCTCATACCAGGAACTGAGCCTGATTCTGGATCTGTTGAGTTCCTTCATGAAATGAGAATAAAGGCATCAGCTAAGTTGACTCTTCTTCATTCTATGCTAAAGATTCTATATAAGGAAGGTCACAGAGTTCTTATTTTCTCACAAATGACCAAGCTTCTTGACATCCTGGAGGACTATTTGACTATAGAATTTGGGCCTAAAACATATGAGAGAGTGGATGGATCTGTTTCTGTAACTGATCGCCAGTCAGCGATTGCACGCTTTAACCAAGACAAAAGTCGTTTTGTTTTCTTGTTATCCACTCGTTCTTGTGGACTTGGGATAAATTTGGCAACTGCTGACACTGTCATCATCTATGATTCTGATTTCAACCCCCATGCAGATATCCAAGCAATGAATCGTGCACACAGAATTGGACAATCAAATAGACTTTTGGTATACCGGCTTGTGGTTCGTGCTAGTGTTGAAGAGCGCATCTTGCAGCTTGCTAAGAAGAAACTGATGCTTGATCAGCTTTTTGTAAATAAATCTGGATCTCAAAAAGAAGTAGAAGATATTTTAAAATGGGGAACTGAGGAACTCTTCAATGATTCCCCTGGGCTTAATGGGAAAGACATGAATGAAAATAACAATAGTAGCAAAGATGAGGCAGTAGCAGATATAGAACATAAGCATCGGAAGAGGACTGGTGGCCTTGGAGATGTATACAAGGATAAGTGTACTGAGAGCAGCAGCAAGATTCTGTGGGATGAAAATGCTATTTTAAAATTGCTTGATCGCTCAAACCTTCAAGACGGTTCAACAGATATTGCTGAAGGGGATTCTGAGAATGATATGTTGGGCTCAGTGAAGGCCCTTGAGTGGAATGACGAACCAATTGAAGAACATGTTGTGGGTGAATCTCCTCCTCAAGGGACTGATGATATGTGTACACAAAATCCTGAGAAAAAAGAGGATAATGCAGTGAATGGCAATGAAGAAAATGAATGGGACAGACTACTGCGTGTGAGGTGGGAGAAATATCAAAGTGAGGAGGAGGCAGCTCTTGGTCGAGGGAAGCGGCAGAGGAAAGCTGTTTCTTATAGGGAAGTATATGCTCCACATCCAAGTGAAACAATGAGTGAGAGTGGTGGTGAAGAGGAAAAAGAGCCAGAACCAGAGCCTGAGCATGAATATACACCAGCAGGACGGGCCATGAAAGAAAAATTTGCTAAACTCCGTGCTCGACAAAAGGTAAGAATTGCCTGGAGGAAACAGATTGAAGAATCACATCCTGCCGAGGGACTTCCAGGTAATGAGTTACTCTCTCATTCTCCGGCCATTACCAAGGGTAGGGATCTAGGGGCTGGATCGATGCATTCAGTTCAAGAGGGGCCTCCTATCAACTTAGAGGATAGCAAATACACACAACTTTCAGAAGCTCGTAATAGCAACACTGAACTCTTATCAAGGATTGACAAGCTTTCAAAACATAAAATGAATAGTCACTTTGATGCTTCTGCCAGTAATCCAGGCCGTTCTCTCCCTGATATTTTCCTTCCAAGTCATCCCAAGGGGGGGCTGAGCATGACGAATTCTATGCCCACCAACAATTTGTTGCCTGTTCTTGGACTTTGTGCTCCTAATGCCAACCAAATAGAATCGTCAGAAAGTAATATTTCAAAGTTAAATTGGAGACAAAATAGACATGGATCCAGACAAGAGTTTCCATTCAGTCTCGCCCCTTGCTCTGGGAGATCCTTGGATACTGAGGTCAGAGGTAAGGAAGTGGCAGCAAATGCCAAGCGGACAGATGCATCAACAGAAAATTTACAACCAAGTTTCAAAAATAGCATCCCTGATAACTGTCTCCCATTTGTTCCGTTTCCACCCTCTATGCAAGGAAAGGAATCTGATGCATTTGAAAATTCAGGTGGTAGATTCTCTCATTTTCAGGAGAAGATGGCCTTGCCAAACATGCCATTTGATGAAAGGTTGCTGGCCAGATTTCCACTTACATCCAAGAGCATGCCAAATTCACATCTGGACCTCTTGCCCAATTTGTCTATAGGAGGAAGACTTGAATCTTTGAATGCATCTATGCAAGACCTTCCAACAATGCCAGCATTGCCTACTTTCAAAATACCCCCCGAGGATTTATTCAGATATAATCAGCAGGACAGGGATATGCCCCCTCCTTTGGGTTTGGGACATAGGCCAACCACATTCTCATCTTTCCCAGAAAATCATAGGAAGGTGCTTGAAAACATAATGATGAGAACTGGGTCTGGATCAGGTAATTTATTGAAAAAGAAGTCAAAATCAGATGGGTGGTCTGAAGATGAACTTGATTCCCTCTGGATTGGTGTTCGTAGGCATGGAAGGGGTAATTGGGATGCTATGCTCAGAGATCCCAAGTTAAAGTTTTCGAAGTATAAAACATCTGAGGATTTATCAGTGAGGTGGGAAGAGGAACAAGTAAAGGTATTTCAGGGGCCACCTTTTCCTGCACAAAGATCATCCAAGACGACAAAGTCTACCAAATCGGCACATTTTCCAATCTCTGATGGAATGATGGAAAGGGCCTTGCAGGGGAGCAAATTTCTTTTGCCACCAAAATTTCAAAACCATCTGACTGACATGAAATTAGGGATAGGAGATTCTGCTTCTAGTCTGCCGCATTTTAGAACATTGGATCGACCTAGTCTGCAAAATGATCACTTTGCACCTCTTCCATCTTGGAGTTATGATAAAAATAGAGCAAAATTTTCTGAAGATGCTTCTGCTGAAACATCTGATAGACCAGGTACTTCTTCCAGTGTACCAACTGAAAGACCATTTCTGCTCAATTCTTTTGGAACCAGTACCACCTTGGGTTCTTTAGGTTTGAATTGCTCAGGCAGCATTGATACACAGCAGAAGGAGGATGACCAAGGACACTCCAAGCGTGGAAAGTTGCCCATACTTCTGGATGGATCACCCAATGATATACGTGATAATCGCATTAATATTGGAAATGGTGAATCTTCTAGCTCTGGATTGTTATCTAACCCCATTAGACCTGATATTTTGCACTCAAAAGCAGAGGAAGTGGGTGGAAGCAGCACTTCAAAAGACAAGCTTCCTCACTGGTTACGTGAAGCGGTGAGCTCCCCAGCCAAACTTCCTGATCCTGAACTACCACCCACAGTATCAGCCATTGCTCAATCAGTTCGCCTGTTATACGGGGAAGACAAGCCTACAATTCCTCCATTTGTGGTTCCTGGACCACCTCCCTCCCTACCTAAGGATCCCAGGAGTAGTGTCAAGAAGAAAAAGAAGAGAAGATCACACAAATTCAATCGGGGCCTTCCAGATTTTGCTGGAAACAGCAGGGACTTGCTTAGCCGTCACCATGTTGATAATGGGGCTTCGAGCTCAATTCCTTTGGGTCCACCACTACTTTCTCAGACTGGACCTCAGCAGATTGAATCTGACCTTAACTTGCCTCCTCTAAATTTGAAAGTGTCAAACCCTTCAAACTCTTCAAGAAAGGCTAATTCAGGACTGTCACCTTCTCCTGAAGTTCTCCAGCTGGTTGCATCCTGTGTTGCTCCTGGCACCCATCTTCCATCAATCCCTGGTGCTTCAAAATTTCTTGAGAGCAAGCTTCCATTGCCAAGGCCTGTTGGCAGAGCCAAATTCAAAGACTCAGAAGGTGCCTTCAGAAACAAGAATCCTAGGCAGGTTTCACCAAAAATTTGGTGTTCACCTCAGGACCAAAAAGTACTAGACCTTGACAGTGGAGATTCCAGCAAGACTCAGTCAGATCCCTCTCGGGCTGAACGGCCGGATGAAGTGGAGGTCTCATCTGAGGGAACTGTATCTGATCATGCTGTGAGAGATCAGGAAACATAA 7017 0.412 MMKENKSSTPKMLNRNWLSKRKRRKLPLGLGLDQSSKKEQSNGKEENSTSESSRNASAKRVLKTEVATDQMSSKKKGNDGYYYECVICDVGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPRCFEGNDQLKPINHLDPISKRARTKVVTAKSKGQVNSLNLEKVPGLFGSKLISKKRSSSKGKSISAMGMNFFGKKLSSSPVDETCSNKPIDPSLESPMEGTSSCADADEKKLSLSPTVSPMDMKSTSPAKEVLSLSKITNLEENEDLEGKSDLSCNKIPSRKTLVLAIAASGEEVRKRKNKVVNDNTSQKKQRTEKGKKIVNPSIKSKSGNNKVHKQKSITHSVSASVSKKDVGNKNSYAQQKDEKFPKVMKDTSNEPDKARSLVDETLMHEDSAIAESLQVDRVLGCRIQDENANSLRPLSLNAADDSTSGDLLTSENQTRVLEDNSAFANDLDIESTENLVDDHQNVVKSSDEERTLDNTNRVERIHVYRRSIAKESKKGNPVDSLSKDTDDLGSCAREGKDQDDSAVSAEQLEKSNDKMETEESINVALRSEDNSELQKNCEIHVSPETKQKEMNAEKGMGDSIDNKAQDGNIIECTGPNGEKVFYEFLVKWVGKSHIHNSWISESQLKVLAKRKLENYKAKYGMAIINICEERWKQPQRVLALRTSNHGTSEAFVKWTGLPYDECTWESLDEPVLQDSSHLITVFNKLETLTLERDSSKENSTRKSNDHQIDIFNLTEQPKDLKGGSLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAFLSSLYFEFKVSLPCLVLVPLSTMPNWLAEFALWAPDVNVVEYHGCAKARAIIRQYEWHANDPSGLNKKTEAYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLSSFEEKFNDLTTAEKVDELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKILYKEGHRVLIFSQMTKLLDILEDYLTIEFGPKTYERVDGSVSVTDRQSAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFNDSPGLNGKDMNENNNSSKDEAVADIEHKHRKRTGGLGDVYKDKCTESSSKILWDENAILKLLDRSNLQDGSTDIAEGDSENDMLGSVKALEWNDEPIEEHVVGESPPQGTDDMCTQNPEKKEDNAVNGNEENEWDRLLRVRWEKYQSEEEAALGRGKRQRKAVSYREVYAPHPSETMSESGGEEEKEPEPEPEHEYTPAGRAMKEKFAKLRARQKVRIAWRKQIEESHPAEGLPGNELLSHSPAITKGRDLGAGSMHSVQEGPPINLEDSKYTQLSEARNSNTELLSRIDKLSKHKMNSHFDASASNPGRSLPDIFLPSHPKGGLSMTNSMPTNNLLPVLGLCAPNANQIESSESNISKLNWRQNRHGSRQEFPFSLAPCSGRSLDTEVRGKEVAANAKRTDASTENLQPSFKNSIPDNCLPFVPFPPSMQGKESDAFENSGGRFSHFQEKMALPNMPFDERLLARFPLTSKSMPNSHLDLLPNLSIGGRLESLNASMQDLPTMPALPTFKIPPEDLFRYNQQDRDMPPPLGLGHRPTTFSSFPENHRKVLENIMMRTGSGSGNLLKKKSKSDGWSEDELDSLWIGVRRHGRGNWDAMLRDPKLKFSKYKTSEDLSVRWEEEQVKVFQGPPFPAQRSSKTTKSTKSAHFPISDGMMERALQGSKFLLPPKFQNHLTDMKLGIGDSASSLPHFRTLDRPSLQNDHFAPLPSWSYDKNRAKFSEDASAETSDRPGTSSSVPTERPFLLNSFGTSTTLGSLGLNCSGSIDTQQKEDDQGHSKRGKLPILLDGSPNDIRDNRINIGNGESSSSGLLSNPIRPDILHSKAEEVGGSSTSKDKLPHWLREAVSSPAKLPDPELPPTVSAIAQSVRLLYGEDKPTIPPFVVPGPPPSLPKDPRSSVKKKKKRRSHKFNRGLPDFAGNSRDLLSRHHVDNGASSSIPLGPPLLSQTGPQQIESDLNLPPLNLKVSNPSNSSRKANSGLSPSPEVLQLVASCVAPGTHLPSIPGASKFLESKLPLPRPVGRAKFKDSEGAFRNKNPRQVSPKIWCSPQDQKVLDLDSGDSSKTQSDPSRAERPDEVEVSSEGTVSDHAVRDQET 2338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01611 2338 MobiDBLite consensus disorder prediction 1876 1891 - -
Cca09g01611 2338 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1075 1234 IPR001650 -
Cca09g01611 2338 Pfam Helicase conserved C-terminal domain 1076 1186 IPR001650 -
Cca09g01611 2338 ProSiteProfiles Chromo and chromo shadow domain profile. 581 649 IPR000953 -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 301 383 - -
Cca09g01611 2338 Gene3D - 665 715 - -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 1471 1510 - -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 361 383 - -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 205 254 - -
Cca09g01611 2338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 732 980 IPR027417 -
Cca09g01611 2338 Coils Coil 460 480 - -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 205 224 - -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 1392 1443 - -
Cca09g01611 2338 CDD PHD2_CHD_II 85 126 - -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 2309 2338 - -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 1 75 - -
Cca09g01611 2338 SMART PHD_3 84 127 IPR001965 -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 301 326 - -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 1358 1373 - -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 1392 1408 - -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 1965 1986 - -
Cca09g01611 2338 Gene3D - 990 1217 IPR027417 -
Cca09g01611 2338 Pfam CHD subfamily II, DUF1087 1364 1410 IPR009463 -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 2122 2225 - -
Cca09g01611 2338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 982 1243 IPR027417 -
Cca09g01611 2338 Pfam Chromo (CHRromatin Organisation MOdifier) domain 664 715 IPR023780 -
Cca09g01611 2338 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 768 945 IPR014001 -
Cca09g01611 2338 ProSiteProfiles Zinc finger PHD-type profile. 82 129 IPR019787 -
Cca09g01611 2338 PANTHER PROTEIN CHROMATIN REMODELING 4 16 2332 - -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 499 550 - -
Cca09g01611 2338 Pfam SNF2-related domain 774 1049 IPR000330 GO:0005524|GO:0140658
Cca09g01611 2338 ProSiteProfiles Chromo and chromo shadow domain profile. 663 725 IPR000953 -
Cca09g01611 2338 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 16 2332 - -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 328 360 - -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 1343 1373 - -
Cca09g01611 2338 SMART chromo_7 661 718 IPR000953 -
Cca09g01611 2338 SMART chromo_7 403 651 IPR000953 -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 2264 2338 - -
Cca09g01611 2338 Pfam PHD-finger 85 126 IPR019787 -
Cca09g01611 2338 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 137 IPR013083 -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 2123 2137 - -
Cca09g01611 2338 Coils Coil 1518 1538 - -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 2182 2225 - -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 1872 1891 - -
Cca09g01611 2338 CDD CD1_tandem 604 647 - -
Cca09g01611 2338 Gene3D - 747 989 IPR038718 -
Cca09g01611 2338 SUPERFAMILY FYVE/PHD zinc finger 79 129 IPR011011 -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 2006 2034 - -
Cca09g01611 2338 Gene3D - 1793 1891 - -
Cca09g01611 2338 SUPERFAMILY Chromo domain-like 608 651 IPR016197 -
Cca09g01611 2338 MobiDBLite consensus disorder prediction 1970 1986 - -
Cca09g01611 2338 SUPERFAMILY Homeodomain-like 1817 1863 IPR009057 -
Cca09g01611 2338 SUPERFAMILY Chromo domain-like 655 701 IPR016197 -
Cca09g01611 2338 ProSitePatterns Zinc finger PHD-type signature. 85 126 IPR019786 -
Cca09g01611 2338 SMART ultradead3 752 956 IPR014001 -
Cca09g01611 2338 Gene3D - 573 650 - -
Cca09g01611 2338 CDD SF2_C_SNF 1070 1197 - -
Cca09g01611 2338 SMART helicmild6 1101 1186 IPR001650 -
Cca09g01611 2338 SMART DUF1087_2 1351 1416 IPR009463 -
Cca09g01611 2338 CDD CD2_tandem 662 715 - -
Cca09g01611 2338 CDD SANT_TRF 1818 1862 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01611 Cca-Chr9 39918874 39938354 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01611 745 1229 RAD5 or RAD16-like Gene Family AT1G02670 26.095 3.31e-34 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Cca09g01611 SNF2_N 5.5e-58 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01611 - - gmx:100793933 4023.78