Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca09g01539 | ATGGTGAAAATCTCGGTTGGTGGATACGACGATGGGGAAGGACCCAGCAACCGCAACCAGAAGCGACGCAGGgaagaggaagaagaagaagaCCACCAACCGCAACAAAGCTTTGAAATCGTAGACCACCCTTCAATTGCAACACAAGAACACGAAGATCACCCTGCTCCACCCAATGATGGTGGATCCAACGCTAACACAAACGCCTCTGCAGCAACTAATGGCAGGGATAGGTCCATTCCCATCTTCGTTTCCGACCCTGATGTCCTCGATTGCTGCATTTGCTATGAACCCTTGAATGCCCCTGTCTTCCAGTGTGAGAATGGACATATTGCTTGCTCTAGTTGCTGTGTTAGACTCAGGAACAAGTGTCCCATGTGTTTAATGCCTATTGGATATAACCGTTGCCGAGCTATTGAGAAGGTGCTGGACTCTATCAAAATGTCATGCCCGAATGCAAATTATGGCTGCAAAGAGACATTTAGTTACAGCAGGAAAAACGACCACGAGAAGGAATGCATCTATCTACCATGTTTATGCCCACTTGCAGGTTGCGATTTTGTTGCCTCATCCAAGGAGTTATTCCTTCACTTCAGCCATAGACATGTGGGCTTTGGAACACAGTTTCAATATGATAAGTTTTTCACTGTCATCTTAAGTACCGACCAAAAAACAACTGTTCTTCAAGAGAAAAATGATGCTAATCTGTTTGTTGTTCACAATAACCATGAGCATCTTGGGAATGTAGTTCGCATTAGTTGCATTGGCCCCAAGTCCATGGCAGAGTTTCAGTATGAAGTTTTGGCTAGGTTTCGAGGAAGCACTCTAATATTGCAATCTTTTGCCAAGATCACTCAAGGCCAATTTGCTGATGCTCCTCCAAATGCGTTCCTTTTGATTCCGTCTGGTTTTTTTGGCTCTCGGCCACTGAAATTGGATATTCGCATAAAGTCACAACATTAA | 963 | 0.4372 | MVKISVGGYDDGEGPSNRNQKRRREEEEEEDHQPQQSFEIVDHPSIATQEHEDHPAPPNDGGSNANTNASAATNGRDRSIPIFVSDPDVLDCCICYEPLNAPVFQCENGHIACSSCCVRLRNKCPMCLMPIGYNRCRAIEKVLDSIKMSCPNANYGCKETFSYSRKNDHEKECIYLPCLCPLAGCDFVASSKELFLHFSHRHVGFGTQFQYDKFFTVILSTDQKTTVLQEKNDANLFVVHNNHEHLGNVVRISCIGPKSMAEFQYEVLARFRGSTLILQSFAKITQGQFADAPPNAFLLIPSGFFGSRPLKLDIRIKSQH | 320 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca09g01539 | 320 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 | 17 | 318 | IPR044286 | - | |
Cca09g01539 | 320 | SUPERFAMILY | TRAF domain-like | 145 | 316 | - | - | |
Cca09g01539 | 320 | MobiDBLite | consensus disorder prediction | 1 | 73 | - | - | |
Cca09g01539 | 320 | CDD | RING-HC_SIAHs | 90 | 127 | - | - | |
Cca09g01539 | 320 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 | 17 | 318 | - | - | |
Cca09g01539 | 320 | Pfam | Seven in absentia protein family | 135 | 267 | IPR018121 | GO:0005737|GO:0006511|GO:0007275 | |
Cca09g01539 | 320 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 140 | 198 | IPR013083 | - | |
Cca09g01539 | 320 | ProSiteProfiles | Zinc finger RING-type profile. | 92 | 127 | IPR001841 | - | |
Cca09g01539 | 320 | ProSiteProfiles | Zinc finger SIAH-type profile. | 145 | 203 | IPR013010 | GO:0008270 | |
Cca09g01539 | 320 | MobiDBLite | consensus disorder prediction | 15 | 37 | - | - | |
Cca09g01539 | 320 | SUPERFAMILY | RING/U-box | 91 | 133 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca09g01539 | 88 | 202 | C3H Transcription Factor Family | AT2G41980 | 37.607 | 1.01e-20 | 89.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca09g01539 | K04506 | - | gmx:100778869 | 528.094 |