Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01537 ATGGCTACCATTTCTTCAACTTGGTACCTATTGCTTCCCATAATTTTATCGTTATGCCCCACAACACTATGTGCAACAGTTATAGAAGATCTCAAAAACTTACATCAACCTCCAGATTTTAACTCTACAATTTTATCCAACTGTCTCAAGAACCCATCTCTTAGGTACTGCAGTTCCTCACCCATGACGGACCTTGATGAAATATTCAAATTCACTATTGTTGCAAGCCATCTCTGCAATGAATCAAAGAACCCCAATTGTGTGGAGTCATTCCCCAAAGTTGATCTCAGAAACCGCCCCAATATTGCACCGCTTTATTTGTCCTTTGGTTTCTTTTGGAAGTATTGCCCCTTGACCATTATGTCCATTGATTTGTCCAACAATTCCATGAAGGGTGATTTTCCAATTGATGTTCTCCATTGCACCCAAATCCAGTCTCTTGATCTAAGTACCAATGCATTTTCTGGGGACATTCCAATTCAAAGTTTCTCTCCCTTGATCAACCTCACTTTTCTGAACCTCTCCTATAACTGCTTTTCAGAGAGTAAACTGTCTGATTCCCATTTCTTCAAAAGGTTTAACTCTTCTAGTTTTCTTCACTCTGGTGCTCTCTTGGATCGCAAAAGGTTTACACTAAAGGCTGTTGTTCTATTGGTTGGCTTTCCCATCCTTGTCATTTTGATGGTGATTGGCTTGGTATGGCTTTGTTTCCAAAGGCCTGATATTTTACCAAGAAAACTTCAAACAAGTATGAGGTTTACACCAGCAATTCTAAAGGCAGCAACTGCTGATTTTTCAAACGAGAATTTGATGGGGATGAGTGATGTTGTTCACATATACAAAGGGATCTTGAGAGATGGTACTGAAGTGAAAATTGAGATGTACTTTGATGATATACCAAGGGATAGTTATCGTAAATTTGTTGAAGAATGTAAGGTTTTGTGTAAGTTACACCACAAGAACCTTGTTAGAGTTATGGGGTGGTGTAGGAGCAGAAAATTCAGAGCCATTATAACAGAATGGACAAAAGAAGAAAATGTTGAAATGTGGTTATCAGGGTCGGGTCCACCATGGAATCATAGATTGAAAGTGTTAATGGGAGTTATTGAATGCATGCGTTATCTGCATGAGGAATGGCCTGAGGTTGACTATGAACTCAACACAAGTAGTATTTTATTGTCTGACAATATGGAACCGTTAATTTCGAGGTTCAAAGTTGTAGATCAAAACAACAATCGAAGAAAGATATATAGGGTTGGAGTATTCCTGCTAGAGATGATACTAAACAGAAAGGTTAAAGAGGAGTTTGATGAAGGTCATGCTGGATTTATTAGGTACATGAGAACCCTTAATCCAGAAGATTTGCAACAGAAGATTGATGAGAGAATGGAAGTAACTGAAACAAATTTTCATCAAGTTAAACAGGTTCTATCACTGGGATTAATGTGCATAGACCAATCAAACAATGAGAAGCCAAGCTTTGCTATGATATTTAACACTATAGCAAGAGCCTACAAGGCTACCCTTGTATCTGTAAATCATAGAATATTTCACGGGGAGAAATTTAAGGGACACGTGCATGTTCAAACCTGA 1593 0.3829 MATISSTWYLLLPIILSLCPTTLCATVIEDLKNLHQPPDFNSTILSNCLKNPSLRYCSSSPMTDLDEIFKFTIVASHLCNESKNPNCVESFPKVDLRNRPNIAPLYLSFGFFWKYCPLTIMSIDLSNNSMKGDFPIDVLHCTQIQSLDLSTNAFSGDIPIQSFSPLINLTFLNLSYNCFSESKLSDSHFFKRFNSSSFLHSGALLDRKRFTLKAVVLLVGFPILVILMVIGLVWLCFQRPDILPRKLQTSMRFTPAILKAATADFSNENLMGMSDVVHIYKGILRDGTEVKIEMYFDDIPRDSYRKFVEECKVLCKLHHKNLVRVMGWCRSRKFRAIITEWTKEENVEMWLSGSGPPWNHRLKVLMGVIECMRYLHEEWPEVDYELNTSSILLSDNMEPLISRFKVVDQNNNRRKIYRVGVFLLEMILNRKVKEEFDEGHAGFIRYMRTLNPEDLQQKIDERMEVTETNFHQVKQVLSLGLMCIDQSNNEKPSFAMIFNTIARAYKATLVSVNHRIFHGEKFKGHVHVQT 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01537 530 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 6 529 - -
Cca09g01537 530 SUPERFAMILY Protein kinase-like (PK-like) 244 501 IPR011009 -
Cca09g01537 530 Pfam Protein tyrosine and serine/threonine kinase 272 411 IPR001245 GO:0004672|GO:0006468
Cca09g01537 530 Gene3D Ribonuclease Inhibitor 73 191 IPR032675 -
Cca09g01537 530 Gene3D Phosphorylase Kinase; domain 1 241 341 - -
Cca09g01537 530 ProSiteProfiles Protein kinase domain profile. 265 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01537 530 Gene3D Transferase(Phosphotransferase) domain 1 409 503 - -
Cca09g01537 530 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 529 - -
Cca09g01537 530 SUPERFAMILY L domain-like 82 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01537 Cca-Chr9 38879959 38881667 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01537 122 521 Receptor kinase-like Gene Family AT5G45780 23.579 7.10e-25 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Cca09g01537 PK_Tyr_Ser-Thr 2.3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01537 - - gmx:100779045 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01537 09 38879959 38881667 Cca09g01537 09 38879959 38881667 ECH