Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01531 ATGGAACAGTACGAGAAGGTTGAGAAGATAGGTGAAGGCACCTACGGCGTCGTTTACAAGGCTCGTGACCGCGTCACCAACGAGACCATCGCATTGAAGAAGATTCGCCTCGAGCAGGAAGACGAGGGCGTTCCCAGCACCGCCATTCGGGAGATTTCTCTCTTGAAAGAAATGCAGCACAGGAACATTGTTAGGTTGCAGGATGTAGTACACAGTGAGAAGCGTTTGTATCTGGTTTTTGAGTACCTTGACTTGGATCTAAAGAAGCACATGGACTCATCTCCAGAATTTGCAAAAGATCTACGACAAGTAAAAATGTTCCTTTACCAAATTCTCTGTGGCATTGCTTACTGTCATTCACATAGAGTTCTTCATCGTGACTTAAAACCACAGAATTTGTTGATAGATCGTAGCACTAATGCACTAAAGCTTGCAGATTTTGGATTGGCTAGGGCATTTGGAATTCCTGTTAGAACATTTACACATGAGGTGGTAACACTGTGGTACAGAGCTCCAGAAATTTTGCTTGGATCCCGTCATTATTCTACTCCAGTTGATATTTGGTCAGTGGGATGCATATTTGCAGAGATGGTAAATCAACGTCCTCTTTTTGCTGGGGACTCTGAGATTGATGAGTTGTTTAAAATATTCAGGTGGTTGAAGGATAAATCGGGCACAAGCCTCAAGCGTCCATGTCAGTCAAGGAAATAA 711 0.4346 MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFAKDLRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRSTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQRPLFAGDSEIDELFKIFRWLKDKSGTSLKRPCQSRK 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01531 236 SUPERFAMILY Protein kinase-like (PK-like) 1 220 IPR011009 -
Cca09g01531 236 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Cca09g01531 236 Gene3D Transferase(Phosphotransferase) domain 1 86 236 - -
Cca09g01531 236 PIRSF ILK 1 218 - -
Cca09g01531 236 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Cca09g01531 236 PANTHER CELL DIVISION PROTEIN KINASE 3 219 - -
Cca09g01531 236 SMART serkin_6 4 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01531 236 ProSiteProfiles Protein kinase domain profile. 4 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01531 236 PANTHER - 3 219 - -
Cca09g01531 236 Pfam Protein kinase domain 4 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01531 236 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01531 Cca-Chr9 38792950 38801294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01531 1 218 Core Cell Cycle Gene Families AT3G48750 90.367 2.65e-149 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Cca09g01531 Pkinase 5.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01531 K02206 - qsu:112012085 429.869