Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01518 ATGGCGTCGTCGAAGGTTGTCTCGACGAATCCGGATCTGCCACGCGACTCATCTATATCTCCCATTTGCTCCCTTCTCTCCGATCTCAACCCCACCTCCATGGACGACCTCCTCAAGTCCATCACCCCCGCCGCCAAGACCGTCGACGACGTCTGGAAGGAGATCGTCGGCGGCGCCGCCGCCCACCCCGCCGCCAACGACGACACCCTCCAGATGACCCTCGAGGATTTCCTCACCAAGGCCGGCGCCGTCAGGGAGGAAGACGTCCGAGGCGGTGGCGGCGGTGGCGGCCCTTCCTCCCTCCCCTTCCCCCTCCCCGAGGGCTCCTCCTCCTCCGTCGAGCCTTTCGGCAACGGCGTCGCGCCCTCTCCTTCCGTTCACAAAGGGAAGCGAAGGGCCGTTGAGGAGCCTGTTGATAAGGCCACTCTTCAGAAGCAGAGGAGGATGATCAAGAATAGAGAGTCCGCCGCTAGGTCCAGGGAACGCAAGCAGGCTTACACTTCTGAGCTCGAGTTTTTGGTTCACCAGCTGGAGCAAGAGAATGCGCGCTTGTTGAATGAAGAGGCTGATATGAGAAGGCAGAGGAAAAAACAGCTAGTTGAGTGCATCATTCCAATTGAGGTGATGTCTAAACCAAAAAAAAAACTTCGGAGAGTAAATtcagcaccatcatcattgtga 681 0.5653 MASSKVVSTNPDLPRDSSISPICSLLSDLNPTSMDDLLKSITPAAKTVDDVWKEIVGGAAAHPAANDDTLQMTLEDFLTKAGAVREEDVRGGGGGGGPSSLPFPLPEGSSSSVEPFGNGVAPSPSVHKGKRRAVEEPVDKATLQKQRRMIKNRESAARSRERKQAYTSELEFLVHQLEQENARLLNEEADMRRQRKKQLVECIIPIEVMSKPKKKLRRVNSAPSSL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01518 226 SUPERFAMILY Leucine zipper domain 144 195 IPR046347 GO:0003700|GO:0006355
Cca09g01518 226 MobiDBLite consensus disorder prediction 87 139 - -
Cca09g01518 226 MobiDBLite consensus disorder prediction 1 20 - -
Cca09g01518 226 Gene3D - 143 196 - -
Cca09g01518 226 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 222 IPR043452 GO:0003700|GO:0045893
Cca09g01518 226 MobiDBLite consensus disorder prediction 104 118 - -
Cca09g01518 226 PANTHER OS05G0437700 PROTEIN 2 222 - -
Cca09g01518 226 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 147 162 IPR004827 GO:0003700|GO:0006355
Cca09g01518 226 Pfam bZIP transcription factor 141 195 IPR004827 GO:0003700|GO:0006355
Cca09g01518 226 Coils Coil 163 197 - -
Cca09g01518 226 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 142 194 IPR004827 GO:0003700|GO:0006355
Cca09g01518 226 CDD bZIP_plant_BZIP46 144 184 - -
Cca09g01518 226 SMART brlzneu 140 204 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01518 Cca-Chr9 38638909 38642465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01518 46 221 bZIP Transcription Factor Family AT5G44080 43.878 6.04e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca09g01518 bZIP_1 2.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01518 K14432 - gmx:100101890 297.36