Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01513 ATGGATAATTTATACAAAATTGAAGCCGTGGGTAATGTGAAACCTATACTGTTAATGATAGTGGTCCAGACTCTATATGCAGTGGTGAATATCATGATAAAGTTGGTAGCAGATGATGGAATGAGTTTGAGTATTCTTGTTACCTACCGGTTCATCTTTGCTTCAGCCTTCATTGTTCCACTTGCTCTTATCTTTGAAAGGAAAAGTCTGCAATGTCTTACTGGGCAAGTTCTACTCCAAGGTCTTCTTTGTGGAGTATTTGGGGGAGCCTTACTGCAAAATCTCTATGTTAAATCCTTGGCCTTGACATCCGCAGTTTATGTTACAGCCATGCTGAACCTCATCCCTGCTGTCACATACGTCTTGTCAGTTTTTGTTGGATTTGAGAAGTCAAATCTTGGAACAGTAGGTGGGATGGCGAAGTTGGTGGGAACATTAACAGGAATTGCGGGTGCCATGATCCTAACTTTCTACAAAGGAAGAAGGCTATGCCTTTGGTCAACATACATTGACTTGTCGCACCATGCCACATCACCACCCACTGCCCCCACCGGTTCTCTTCTGTGGGGCTGCATTCTAGCTTTTGCAGCCACTCTCAGTTACTCCTTGTGGTTGATAGTCCAGACAAAGATGAGCCAGAAGTTTCCGTGGCACTACTCAATTGCAGCTTTAACCTCTGTAACGGCCTCAATCCTATCCGTTATATTTGCACTTTGTACGGAGAGAGATTGGAGCCAGTGGAAACTTGGTTGGAACTTGAGGCTTCTAACAGCAGCTTCTGCGGGTATCTTTGCCTCTGGAGTGTGCTATACCCTACTAGCATGGTGTGTGCGCAGGAAGGGACCTTTATTTGCGTCTGCTTTTAGTCCTCTAATGCTGGTGGTCGTGACCCTTGCCGGGCCATTGGTACTAGATGAGTGTCTCAACATTGGAAGTTTAACAGGATCAGTGTTGATTGTGGGTGGATTGTACATGTTGTTGTGGGGTAAAAGCAAGGAAACACCAAGGGAGCTGAGTGAGATGGTGTCCTCAAAAGGCTCTCCCCAATGTGATCCAATTCACATTATTAATAACCCATCTTTGGCATGCAGCCAAAGGAATCATGACAACAAGATTCTACCAACTGTTCCTTCTTGTACACCGTTAAGTGTCAACCATTCATAA 1164 0.4467 MDNLYKIEAVGNVKPILLMIVVQTLYAVVNIMIKLVADDGMSLSILVTYRFIFASAFIVPLALIFERKSLQCLTGQVLLQGLLCGVFGGALLQNLYVKSLALTSAVYVTAMLNLIPAVTYVLSVFVGFEKSNLGTVGGMAKLVGTLTGIAGAMILTFYKGRRLCLWSTYIDLSHHATSPPTAPTGSLLWGCILAFAATLSYSLWLIVQTKMSQKFPWHYSIAALTSVTASILSVIFALCTERDWSQWKLGWNLRLLTAASAGIFASGVCYTLLAWCVRRKGPLFASAFSPLMLVVVTLAGPLVLDECLNIGSLTGSVLIVGGLYMLLWGKSKETPRELSEMVSSKGSPQCDPIHIINNPSLACSQRNHDNKILPTVPSCTPLSVNHS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01513 387 PANTHER WAT1-RELATED PROTEIN 13 365 IPR030184 GO:0016021|GO:0022857
Cca09g01513 387 PANTHER WAT1-RELATED PROTEIN 13 365 - -
Cca09g01513 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 159 - -
Cca09g01513 387 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020|GO:0016021
Cca09g01513 387 Pfam EamA-like transporter family 14 140 IPR000620 GO:0016020|GO:0016021
Cca09g01513 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01513 Cca-Chr9 38560004 38563729 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01513 12 364 Nodulin-like Gene Family AT1G68170 39.437 3.22e-81 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01513 - - aprc:113859960 567.77