Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01512 ATGCAAACCGCAGTAGGGAAGGCAAAGGTGTTGGGAACGATAATAGGAATTGGAGGGTCAATGGTGCTGACATTTTTCAAAGGGGTAGAAATTAACGTTACAACCTTCCGCACTGATCTTTTGCATCACAACGAGCAACATGTAGTAACTTTGCATAGTGACTCTGGTCATAAATTTATGGGTGTTTTGTGTGGTTTTGGAAGCTGCTTCAGTTTTGCATTATGGCTAATCATTCAGTCTAAGATGAGTAAAGAATATCCATGTCATTACTCAAGTACTGCATTGATGTCCTTAATGGCTGCAATACAAGCCACGGCCTTTGCCCTTTATGTTGAAAAGGATTGGAGCCAGTGGAAGTTGGGTTCGAGTATTAGGATTGTAACTGTGGTTTATACGGGAATTGTGGCCTCAGGATTGGTGGTTATTATCATTGCATGGTGTGTACGGATGAGAGGCCCAATGTTTGTGTCTGTTTTCAACCCTGTGATGCTTGTGCTTGTGGCTGTGGCTGATTCTTTTATGTTAGGTGAAAACTTATATGTAGGAAGTGTAATTGGAGCCGTGCTAATTGTGAGTGGGTTGTACATGGTTCTATGGGGCAAGAGCAAAGAAATGAAAAAGGTAGATCAGTCATCGGTCTCGTCAGAAATCACCCAAGAACATGAAGCAACTGAAGTTGTTGTCATGCCCACGACAATAAATAATGGCAATAGTAACTGCATTAAAAATGCCAACTCCAATTGTGAAAGCAATGCCAAAGTTTCTTGA 768 0.4141 MQTAVGKAKVLGTIIGIGGSMVLTFFKGVEINVTTFRTDLLHHNEQHVVTLHSDSGHKFMGVLCGFGSCFSFALWLIIQSKMSKEYPCHYSSTALMSLMAAIQATAFALYVEKDWSQWKLGSSIRIVTVVYTGIVASGLVVIIIAWCVRMRGPMFVSVFNPVMLVLVAVADSFMLGENLYVGSVIGAVLIVSGLYMVLWGKSKEMKKVDQSSVSSEITQEHEATEVVVMPTTINNGNSNCIKNANSNCESNAKVS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01512 255 PANTHER WAT1-RELATED PROTEIN 1 229 IPR030184 GO:0016021|GO:0022857
Cca09g01512 255 Pfam EamA-like transporter family 60 198 IPR000620 GO:0016020|GO:0016021
Cca09g01512 255 PANTHER WAT1-RELATED PROTEIN 1 229 - -
Cca09g01512 255 SUPERFAMILY Multidrug resistance efflux transporter EmrE 115 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01512 Cca-Chr9 38518095 38521062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01512 1 235 Nodulin-like Gene Family AT1G68170 40.506 1.29e-56 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01512 - - gmx:100813812 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g02728 08 61708271 61710888 Cca09g01512 09 38518095 38521062 PCT