Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01511 ATGAACATGAAAAAGGTGTTGCATACGTTGAAACCAGACATCTTAATGGTGTTTGTGCAGATTGCATTTTCTGCAGTGAATGTGGTATTCAAGCTGGCCATAAATGATGGAATGAGCATGAGGATAGCTTCTGCCTATCGCTTCGCATTTGCATCGGCTTTCACTGTCCCCGTTGCTCTTATCTTTGATAGGAAGAAGAGACCAAAGATTACTTGGAGGGTTCTTATATTGGCTTTTCTGTGTGGATTGTTTGGGGGAAGTTTATTCATAAACCTTTACCTGGAGGCCCTCGAATTGACGTCAGCTACATTTATGTCAGCCATGGTCAACCTTAATCCGGCCATTACCTTCATTCTGGCCATATCCTTTGGGTTCGAGAAATTAAATTTAAAAGTAGCAGAAGGAAGGGCAAAGGTGATAGGCACCATAATTGGAATCAGTGGGGCAATGGTGATGACCTTCTTCAGAGGCATAGAAATTAATATATGGTCGTCCAAAATCAACCTTATGCATCCACATCAGAACCAAAATGGTCATGTGGCATTACACCATGCTGACTTTCGAAGTAAACTGTTGGGTATCTCATGTGCCATAGGAAGCTCCTGCTTTTTTTCTTCGTGGTTCATCATTCAGGCTAAAATGAATGCAGAATACCCAAGTCCTCGCTCGAGCACAGCTTTGATGACTACAATGGCAGCAATACAGGCCACTGCTTTTACTCTTTGTGTCGAAAGAGATTGGAACCAATGGAAGCTGGGTTTCAATATCAGGCTTCTAACAGTGGTTTATTCGGGAATTGTGGTCTCTGGAATAGCAGTTGTGATCATTGCCTGGTGCATAAAGAAGAGAGGTCCTCTATTTGCGTCTGTTTTCAATCCTCTGCAGATTTTGCTAGTGGATATTGCAGCTTATTTAACATTGGATGAGAAACTATATTTAGGAAGTGTGCTTGGAGCAGTGATGATCGTGTGCGGTCTATACATGGTGCTTTGGGGTAATGCCCAAGAATTGAAAAAGAAGTCTCGGTTAGTGGCATTAGGAAACACCACAAGAGGAGAGTCAGAAAATGTTGAGGTTGTAAGCCCAGCCCTTAGATCACAATAA 1104 0.4239 MNMKKVLHTLKPDILMVFVQIAFSAVNVVFKLAINDGMSMRIASAYRFAFASAFTVPVALIFDRKKRPKITWRVLILAFLCGLFGGSLFINLYLEALELTSATFMSAMVNLNPAITFILAISFGFEKLNLKVAEGRAKVIGTIIGISGAMVMTFFRGIEINIWSSKINLMHPHQNQNGHVALHHADFRSKLLGISCAIGSSCFFSSWFIIQAKMNAEYPSPRSSTALMTTMAAIQATAFTLCVERDWNQWKLGFNIRLLTVVYSGIVVSGIAVVIIAWCIKKRGPLFASVFNPLQILLVDIAAYLTLDEKLYLGSVLGAVMIVCGLYMVLWGNAQELKKKSRLVALGNTTRGESENVEVVSPALRSQ 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01511 367 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020|GO:0016021
Cca09g01511 367 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020|GO:0016021
Cca09g01511 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 334 - -
Cca09g01511 367 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 11 353 - -
Cca09g01511 367 PANTHER WAT1-RELATED PROTEIN 11 353 IPR030184 GO:0016021|GO:0022857
Cca09g01511 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01511 Cca-Chr9 38484254 38490874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01511 10 341 Nodulin-like Gene Family AT1G25270 40.663 2.68e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01511 - - gsj:114424758 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01511 09 38484254 38490874 Cca08g02728 08 61708271 61710888 PCT
Cca08g02727 08 61648969 61652546 Cca09g01511 09 38484254 38490874 PCT