Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01508 ATGGTTGTTGTGTCACCAAAAATGGCCAACGGTACACCCAATGGTTCCGTGTCACCCAATAACCACGTAGAGGCAGTGCTTTCAAGTCCAGCAAACAAAGTTGATCAAAACCAAATCCTAGTCACCGAAGACAACAACAGCATTGACTATTTACGAAGGGCACAGTGGCTTCGTGCAGCTGTTTTAGGAGCCAATGATGGGTTGGTTTCGGTTGCTTCATTGATGATGGGTGTAGGAGCTGTTAAAAGAGATGCAAAGGCTATGCTACTTAGTGGTTTTGCAGGGTTAGTTGCAGGGGCTTGTGGCATGGCAATAGGAGAGTTTGTTGCTGTGTACACTCAATTAGATGTGGAGGTTGGTCAAATGAAGAGAGACATGAATATGAGGAGTGTGGGAGGGGAGAGAGACTTGGAGATGGAGATGGAGAAAAAAACATTGCCTAATCCATTTCATGCTACTTTGGCTTCTGCATTGTCCTTTTCTATAGGTGCAATGGTGCCTCTACTTTCAGCTGCTTTCATAGCAGATTACAAGAAGAGGGTTATTGTGGTTGTGGTAATGGCTAGCTTGGCTTTGGTGGTGTTTGGAAAGGTGGTGGCTCACCTAGGGAAAACTCATTCGGTAAAGTTCTGTATAAGGTTCCTTCTTGGGGGGTGGATAGCCATGTCCATCACTTTTGGGTTAACCAAATTGCTGGGTGCCAGTGCTTTAGAATAA 717 0.4519 MVVVSPKMANGTPNGSVSPNNHVEAVLSSPANKVDQNQILVTEDNNSIDYLRRAQWLRAAVLGANDGLVSVASLMMGVGAVKRDAKAMLLSGFAGLVAGACGMAIGEFVAVYTQLDVEVGQMKRDMNMRSVGGERDLEMEMEKKTLPNPFHATLASALSFSIGAMVPLLSAAFIADYKKRVIVVVVMASLALVVFGKVVAHLGKTHSVKFCIRFLLGGWIAMSITFGLTKLLGASALE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01508 238 Pfam VIT family 57 124 IPR008217 GO:0005384|GO:0030026
Cca09g01508 238 Pfam VIT family 137 229 IPR008217 GO:0005384|GO:0030026
Cca09g01508 238 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 8 234 - -
Cca09g01508 238 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 8 234 IPR008217 GO:0005384|GO:0030026
Cca09g01508 238 CDD Nodulin-21 55 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01508 Cca-Chr9 38463332 38464364 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01508 31 237 Nodulin-like Gene Family AT3G43660 56.522 3.06e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01508 K22736 - gmx:547974 347.821