Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01507 ATGGCCAACCTTGGAGCTAGAACTAATGGAACAACACCAAACCACATTGAGATCCCTATCCATGCAAATGGAGTGGATCTAAAAACAAGCCAAGGAGTGGAAGAGAGCAATGTTGACTACTCTCAAAGGGCTCAGTGGCTTAGAGCAGCAGTGTTGGGAGCCAACGCTGGTTTGGTCTCTGTTGCCTCGTTGATGATGGGTGTTGGGGCTGTAAAGGAAGACATTGGTGTCATGCTTGTTGCTGGTTTTGCAGGACTAGTTGCTGGGGCTTGTAGCATGGCAATAGGAGAATTTGTTTCTGTGTACACTCAATATGACATAGAAAAGGCTCAGCTTAAGAGAGAGAGAGAATCTAATAACAATAGAGGAGTGGATGATGAAGAGGCTCAAAAGGAGAAGCTTCCAAACCCTTTTCAGGCTGCATTGGCATCAGCACTGGCATTTTCTGTTGGTGCTTTGGTTCCTCTTTTGGCAGCTGTGTTCATAAGGAGTCACAAGATTAGGATGGTGATtgttgctgttgctgttagcttggcattgttggtgttTGGAGGGGTGGGAGCAGTGCTTGGAAAAACACCAGTGGCTAGGTCTTGTTTCAGGGTGCTGATTGGAGGTTGGATGGCTATGGGAATAACATATGGCCTCACCAAGTTGATTGGCTCAGCTGAACTTTGA 678 0.441 MANLGARTNGTTPNHIEIPIHANGVDLKTSQGVEESNVDYSQRAQWLRAAVLGANAGLVSVASLMMGVGAVKEDIGVMLVAGFAGLVAGACSMAIGEFVSVYTQYDIEKAQLKRERESNNNRGVDDEEAQKEKLPNPFQAALASALAFSVGALVPLLAAVFIRSHKIRMVIVAVAVSLALLVFGGVGAVLGKTPVARSCFRVLIGGWMAMGITYGLTKLIGSAEL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01507 225 Pfam VIT family 47 124 IPR008217 GO:0005384|GO:0030026
Cca09g01507 225 Pfam VIT family 130 217 IPR008217 GO:0005384|GO:0030026
Cca09g01507 225 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 2 222 IPR008217 GO:0005384|GO:0030026
Cca09g01507 225 Coils Coil 102 127 - -
Cca09g01507 225 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 2 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01507 Cca-Chr9 38446095 38447174 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01507 34 222 Nodulin-like Gene Family AT3G43660 65.608 6.62e-88 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01507 K22736 - gmx:100802489 334.724