Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01506 ATGTCTTCTCTTGGCACTAGTAGCAATGAAATGCCAATTAACCACATTGAGATTCCCATAAATTCTAATGATATAGAAGCAAAGCCTGGCCAAGACATTGAAGAAAACAATATTGAAAACTCTCAAATGTCACAATGGCTTCTGGCAGCTGTTTTGGGGGCCAGAAATGGGTTGATCTCAGTCACCTTAGTGATGGTAGCTGTTGAAGCTTTGAATGAAGACATCAAAACCATGCTTCTTGCTGGCTTTGCAGGACTAGTTGCAGGGGCTTGCAGTATGCCAGTTGAAGAGTTTGTATCTGTGGACACTATGTTAGACACAGAGGTGGCTCAAATGAAAGTCCAATATAACAAACAAGGGGAAGTGGAGGAAGATGATAAAATTCTTAACCCTTTTCATGCTTCCATAGCATCAACAATTGGATTTTCTATTGGTGCTATGGTGCCAATGCTATCAGCTGTTTTTGTAAGGGACTATAAGATCAGGGTGGTAGTTGTGGTTGCTGTGGCTATCTTGGCTTGGTTAGTATATAGAGGGGTAAGAGTAGTAATTGCCAAAAGTAAAACTCGGTTGAGAAGGACTTGGAATCAGAGTACTGATTGGAGGTTGGATGACTATAGCTATTACTTTTGGCTTTGA 639 0.4085 MSSLGTSSNEMPINHIEIPINSNDIEAKPGQDIEENNIENSQMSQWLLAAVLGARNGLISVTLVMVAVEALNEDIKTMLLAGFAGLVAGACSMPVEEFVSVDTMLDTEVAQMKVQYNKQGEVEEDDKILNPFHASIASTIGFSIGAMVPMLSAVFVRDYKIRVVVVVAVAILAWLVYRGVRVVIAKSKTRLRRTWNQSTDWRLDDYSYYFWL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01506 212 Pfam VIT family 49 119 IPR008217 GO:0005384|GO:0030026
Cca09g01506 212 Pfam VIT family 119 189 IPR008217 GO:0005384|GO:0030026
Cca09g01506 212 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 4 189 IPR008217 GO:0005384|GO:0030026
Cca09g01506 212 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 4 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01506 Cca-Chr9 38441891 38442615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01506 21 187 Nodulin-like Gene Family AT3G43660 43.114 2.30e-43 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01506 K22736 - gmx:100527486 254.218