Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01494 ATGGCAATGCATGCATTTGGTATCCTTTTGGTTGTTCTTTACTCTCTGTTGAAATTTGCATCCTCGGATATCAATTTTGTACGAGATGGGTTTCTGCAAGCAGGGTTGAAAATGGATGGAGCTTCTTATGTGAGACCAAATGGCATACTTACCTTGACAAATAATTCCGCAAAAATCCTTGGCCATGCATTCTATCCATCTCCTTTGCCATTAAAATCTAGCAAAAACAAATCCATTGTGTCAACCTTTAGCACTACCTTTGTGTTTTCCATTGTTCCTAAGTACCCAGATCTTGGTGGACATGGTTTAGCATTCGTCCTAATATCTACCAACCAGCCAAAAGGGTGCCTTGTAAATCAATATTTAGGCCTCCCAAATGAGACAAGTAATCAAGAATTCTCAACCAGGTTCCTAGCCATAGAGTTTGACGGGGTACAAAACCTTGAACTTGAAGACATCAATGACAATCACGTGGGGATAGATATATCCAGTCTCATCTCTAACATTTCTAAGTCAGCAGCATACTACTTACCAAGAAATGACCAAGATCACATCAAGAACGTTTCCATCAGTCTCAAGAGTGGAAAGCCAATTCAAGCATGGGTTGATTACAATGAAGGAGAGATGTTGATGAATGTTACAATTTCTCCCTTTGGCACGCCAAAGCCATATTTTCCTTTGATATCTTATCCCATAGACCTATCTTTGGTGTTAAATGACTACATGTATGCAGGTTTTTCTGCTTCCAACGGTTTGCTGATAGCTGAGCATAATATACATGGTTGGAGCTTTAAAATTGGAGGAGCAGCACAAGTGCTAGATAAATCAGCTGTTCCACGTATTGGGTCAAGTACTTCTAGTAAGGTGGTGCACAAAAAAGACTTCGCAGTAGGTATCACTTTAGCAAGTGCATCTCTTTTTATCTTGACAATTATAGGAGCTATTCATGTCCTGCGCAGATTAAGAAATGGGGACGAGATTTTAGAAGATTGGGAACTTGAATATGCTGCCCGTAAATTTAAATATTCCGAGCTTCGTTCAGCTACAGGAAGGTTTGGAGACAGAAACCTTATTGGGTATGGAGGGTTTGGTAAAGTCTACAAAGGAGTAATCCCTAGCACAGGACTAGAAGTAGCTGTAAAGCGAGTTGCTCCAAATTCAAGACAGGGGATCAGAGAATTTGTTGCGGAAATAACAAGCATGGCACAACTAAAGCATAGAAATTTGGTGCAGTTACATGGGTGGTGCAGGAAGCAGGATGAACTCCTCATTGTTTACGACTATGTACCAAATGGGAGCCTGGACAAGCTTCTGATCCAAAATGATCATCAAAAGAAGAAATTACTAACTTGGGATCAAAGGTACAAGATCATTACTGGAGTTGCTCAAGGGTTGCTGTATCTCCATGAAGAATGTGAACAGCAGGTTGTTCACAGAGATGTAAAGCCAAGCAATATCCTGATAGATGCAGATCTCCAACCAAAGCTTGGAGATTTTGGTCTTGCAAGGACTTACGAGCATGGAATCAATCCACAGACAACACATGTTGTAGGAACACTAGGATACATGGCTCCCGAGATCACAAAGACTGGGAAAGCAAGAACAAGCACAGATGTGTATGGGTATGGCATACTCATTTTGGAAGTAGCATGTGGAAGGAAGCCAATAGAGCCCCAAAAGAATCCTGAGGAACTGGTATTGGTAGACTGGGTTAGAGAACTACATCACCGAGGGGAGATCAACAGAGCTATTGACCCCAGTTTAGATGAGTATGACAAAGATGAAGCTCAGCTTGTGCTTAGTCTTGGATTGCTTTGCTCTCATCCCAATCCTGATAGCAGGCCTAATATGAGAAGGATTGTTCAGTTCCTTCTGGGAGAAACCATCCTTCCTCCACTTCCTCCTGATATTCGCAGTGAAGGTCCAAAGCCAACAATAAGATTCCCGTACAACTTTCCAGATTATCAAGGCCCTTCAAGTTCTCTAGTGTCTTTGTCAAAATATTGTAGTCTTACATGCTTTGATGAGGTGGTCTCAGCCACTGTAGTCACAGGGATGACTTGA 2064 0.4167 MAMHAFGILLVVLYSLLKFASSDINFVRDGFLQAGLKMDGASYVRPNGILTLTNNSAKILGHAFYPSPLPLKSSKNKSIVSTFSTTFVFSIVPKYPDLGGHGLAFVLISTNQPKGCLVNQYLGLPNETSNQEFSTRFLAIEFDGVQNLELEDINDNHVGIDISSLISNISKSAAYYLPRNDQDHIKNVSISLKSGKPIQAWVDYNEGEMLMNVTISPFGTPKPYFPLISYPIDLSLVLNDYMYAGFSASNGLLIAEHNIHGWSFKIGGAAQVLDKSAVPRIGSSTSSKVVHKKDFAVGITLASASLFILTIIGAIHVLRRLRNGDEILEDWELEYAARKFKYSELRSATGRFGDRNLIGYGGFGKVYKGVIPSTGLEVAVKRVAPNSRQGIREFVAEITSMAQLKHRNLVQLHGWCRKQDELLIVYDYVPNGSLDKLLIQNDHQKKKLLTWDQRYKIITGVAQGLLYLHEECEQQVVHRDVKPSNILIDADLQPKLGDFGLARTYEHGINPQTTHVVGTLGYMAPEITKTGKARTSTDVYGYGILILEVACGRKPIEPQKNPEELVLVDWVRELHHRGEINRAIDPSLDEYDKDEAQLVLSLGLLCSHPNPDSRPNMRRIVQFLLGETILPPLPPDIRSEGPKPTIRFPYNFPDYQGPSSSLVSLSKYCSLTCFDEVVSATVVTGMT 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01494 687 Pfam Legume lectin domain 25 277 IPR001220 GO:0030246
Cca09g01494 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Cca09g01494 687 PANTHER - 59 661 - -
Cca09g01494 687 SUPERFAMILY Protein kinase-like (PK-like) 335 657 IPR011009 -
Cca09g01494 687 CDD STKc_IRAK 358 624 - -
Cca09g01494 687 Gene3D Phosphorylase Kinase; domain 1 336 428 - -
Cca09g01494 687 SMART serkin_6 352 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01494 687 Pfam Protein kinase domain 356 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01494 687 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.2-LIKE 59 661 - -
Cca09g01494 687 Gene3D Transferase(Phosphotransferase) domain 1 429 628 - -
Cca09g01494 687 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Cca09g01494 687 ProSiteProfiles Protein kinase domain profile. 352 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01494 687 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 280 IPR013320 -
Cca09g01494 687 Gene3D - 21 273 - -
Cca09g01494 687 CDD lectin_legume_LecRK_Arcelin_ConA 24 268 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01494 Cca-Chr9 38281183 38283450 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01494 23 635 Receptor kinase-like Gene Family AT3G55550 47.249 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Cca09g01494 Pkinase 7.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01494 - - gmx:100801966 1135.17