Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01481 ATGGCAGCTGTAACATCTGGTGCTGTGTTAAATGGGTTTGGATCTCACTTCTTATGTGGAGGAAAGAGGAGTCAGGACCTCCTTGCTGCTAGCATTGGTGGCAAAGTTGGTGGTGCTGTTAGTCCTAAAAGAGTTATTGTGGCAGTTGCTGCTGCACCAAAGAAGTCATGGATCCCTGCTGTAAAAGGTGGTGGGAATTTCACTGATCCAGAATGGCTTGATGGCTCGCTACCAGGTGACTATGGCTTTGACCCTCTAGGACTAGGAAAGGACCCAGCATTCCTGAAATGGTATAGAGAAGCTGAACTCATTCATGGGAGGTGGGCAATGGCTGCAGTTGTGGGCATATTTATTGGTCAGGCCTGGAGTGGAGTTCCATGGTTTGAGGCTGGTGCTGATCCTAATGCACTTGCTCCTTTCTCCTTTGGTTCTCTTCTGGGCACCCAGTTGCTCCTAATGGGATGGGTTGAGAGCAAGAGGTGGGTGGATTTCTTCAACCCAGATTCTCAGTCAGTGGAATGGGCCACCCCATGGTCAAGAACTGCTGAGAACTTTGTTAACTCTACTGGCGATCAAGGCTACCCTGGGGGCAAATTCTTTGATCCTCTGGGATTTGCGGGCACAATCAGGGATGGTGTTTACATTCCAGATACAGAGAAGTTGGAGAGATTGAAATTGGCTGAGATTAAGCATGCTAGGATTGCAATGCTGGCTATGCTGATTTTCTACTTCGAGGCTGGACAAGGGAAGACACCTCTTGGTGCTCTTGGTTTGTGA 777 0.4865 MAAVTSGAVLNGFGSHFLCGGKRSQDLLAASIGGKVGGAVSPKRVIVAVAAAPKKSWIPAVKGGGNFTDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSGVPWFEAGADPNALAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFVNSTGDQGYPGGKFFDPLGFAGTIRDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01481 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
Cca09g01481 258 SUPERFAMILY Chlorophyll a-b binding protein 62 258 - -
Cca09g01481 258 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 258 - -
Cca09g01481 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 258 IPR001344 GO:0009765|GO:0016020
Cca09g01481 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01481 Cca-Chr9 38135424 38136888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01481 1 258 Chloroplast and Mitochondria Gene Families AT1G15820 80.620 7.06e-152 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01481 K08917 - gmx:100783223 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01481 09 38135424 38136888 Cca08g02693 08 61347703 61348869 PCT