Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01469 ATGGCAAACCCTAAATCCAAAAGTCCCAATTCGATGGGCGACGAGGAGGATCCCGACTCCACTGAATCGCGTTGGGTTTTCCAGGAGGACGAGGATCCCTCCGAGATCGAGGACTTCGACGCCGCCGATTTGCGCCACCAGCCTATGTTTGATTCCGAGGAGGAGGATAATGCTGAGCAGAGACTCGTTCGCACTGGTCCAAGAATTGATTCATTCGATGTCGAAGCTCTCGAGGTTCCCGGTGCTCAGAGAAATGACTACGAGGATGCTAGTGTGGGGAAGCGAATTGTGTTGGCCTTTCAAACTCTTGGTGTTGTATTTGGCGATGTTGGAACGAGCCCTTTGTATACCTTCAGTGTTATGTTTAGGAAGGCTCCTATTAATGGGAATGAAGACATTCTCGGAGCATTGTCACTTGTTTTGTACACTTTAATCTTGATTCCGTTAGTGAAGTATGTTCTTGTTGTTCTGTGGGCCAATGATGATGGAGAAGGTGGTACGTTTGCATTGTACTCCTTGATTTGTCGAAATGCTAAGGTGAGTCTTCTTCCCAATCAGTTGCGATCAGATGCCCGAATATCAGGCTTTAGGCTAAAGGTGCCGTCTGCGGAGCTTGAAAGGTCTTTAAAAATCAAGGAAAGGCTAGAGACTTCAGTGACTCTGAAGAAGACTCTATTGTTATTAGTTCTTGCTGGCACTTCCATGGTGATAGCTAATGGGGTTGTTACACCAGCAATGTCAGTACTATCATCTCTTAATGGTTTGAAAGTCGGGGTAGATGCAATTAAGCAAGATGAAGTGGTGATGATTTCTGTTGCCTGCCTAGTCATTTTGTTCAGTGTACAGAAGTATGGAACAAGTAAAATGGGGCTTGTTGTAGGACCTGCTTTGCTCATATGGTTTTGTTCTCTTGCGGGCATTGGTATATACAACCTTGCCAAATATGACAGCGGTGTCTTGAGGGCATTTAATCCTATTCACATATATTATTTCTTTAAAAGGAATTCAACTAAAGCATGGTATTCTCTCGGGGGCTGTCTTTTGTGTGCAACAGGCTCTGAGGCTATGTTTGCAGATCTTTGCTATTTCTCTGTACGATCAGTTCAGCTTACATTTGTATTTCTTGTTTTACCGTGCCTATTGTTGGGCTATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCAGACGCTGGCAATGCCTTTTATTCTTCGGTTCCAAGTGGTGCATTTTGGCCAACTTTCCTCATCGCTAACATTGCTGCATTAATTGCAAGTCGGGCTATGACAACAGCCACATTTTCGTGTATAAAACAGTCAGCTGCACTTGGCTGTTTCCCTCGCCTTAAAATAATTCATACCTCTCGCAAATTTATGGGCCAGATCTATATCCCTGTCATAAACTGGTTTCTCTTGGCTGTTTCTTTGGTGTTTGTCTGCTCTATATCCAGCATTGATGAGATTGGAAATGCATATGGCATTGCTGAGCTGGGGGTGATGATGATGACCACTGTTCTAGTAACTCTTGTTATGCTTCTTATATGGCAGATACACATCATTGTAGTGCTGAGTTTCGCAGTTGTCTTCCTGGGATTGGAGTTGACTTTCTTTTCATCAGTGTTGTGGAGTGTAACAGATGGAAGTTGGATTATATTGGTCTTCGCTGTAATAATGTTTTTTATAATGTTCGTATGGAATTACGGGAGCAAGCTCAAGTATGAAACTGAAGTAAAGCAAAAACTGTCAATGGATTTAATGCGAGAATTAGGCTGCAATCTTGGGACAATACGAGCTCCTGGGATTGGTTTGCTCTATAATGAGTTGGTCAAAGGAATTCCAGGCATTTTCGGGCATTTTCTAACCACACTTCCAGCAATACACTCTATGATCATATTTGTGAGTATTAAGTATGTTCCAGTTCCCATGGTGCCTCAAAGTGAAAGATTCCTTTTTCGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGTTGCATTGCCAGGTATGGTTACAAAGATGTTCGTAAAGAAAATCACCAAACTTTTGAGCAACTGCTGATGGAGAGCCTAGAGAAGTTTATACGACGTGAGGCTCAGGAGAGGTCACTCGAGAGTGATGGGGATGATGATACTGATTCTGAGGATGAGTACTCTGGTTCCAGGGTTCTCATAGGTCCCAATGGGAGTGTTTATTCACTTGGGGTTCCTCTTCTGGCTGAGTTTAATGATACAACTGTACCCAAATTTGAGGCAAGCACATCTGAGGAAGCATGCCCTGCATCTCCCAAGGCCCCGGCGGTTGATGCTGAGCAGAGTCTTGAAAGAGAATTATCATTTATTCGCACGGCAAAAGAATCTGGAGTTGTTTATCTTCTTGGTCACGGGGATATAAGGGCAAGAAAAGACTCATGGTTTATCAAGAAGCTAATTATAAACTATTTTTATTCTTTTCTGAGAAAGAACTGCAGAAGGGGGATCTCAAATTTAAGTGTACCCCATTCACATATGATGCAGGTTGGCATGACCTACATGGTTTGA 2535 0.4308 MANPKSKSPNSMGDEEDPDSTESRWVFQEDEDPSEIEDFDAADLRHQPMFDSEEEDNAEQRLVRTGPRIDSFDVEALEVPGAQRNDYEDASVGKRIVLAFQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLVKYVLVVLWANDDGEGGTFALYSLICRNAKVSLLPNQLRSDARISGFRLKVPSAELERSLKIKERLETSVTLKKTLLLLVLAGTSMVIANGVVTPAMSVLSSLNGLKVGVDAIKQDEVVMISVACLVILFSVQKYGTSKMGLVVGPALLIWFCSLAGIGIYNLAKYDSGVLRAFNPIHIYYFFKRNSTKAWYSLGGCLLCATGSEAMFADLCYFSVRSVQLTFVFLVLPCLLLGYLGQAAYLMENHADAGNAFYSSVPSGAFWPTFLIANIAALIASRAMTTATFSCIKQSAALGCFPRLKIIHTSRKFMGQIYIPVINWFLLAVSLVFVCSISSIDEIGNAYGIAELGVMMMTTVLVTLVMLLIWQIHIIVVLSFAVVFLGLELTFFSSVLWSVTDGSWIILVFAVIMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAIHSMIIFVSIKYVPVPMVPQSERFLFRRVCQRSYHIFRCIARYGYKDVRKENHQTFEQLLMESLEKFIRREAQERSLESDGDDDTDSEDEYSGSRVLIGPNGSVYSLGVPLLAEFNDTTVPKFEASTSEEACPASPKAPAVDAEQSLERELSFIRTAKESGVVYLLGHGDIRARKDSWFIKKLIINYFYSFLRKNCRRGISNLSVPHSHMMQVGMTYMV 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01469 844 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 10 843 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca09g01469 844 MobiDBLite consensus disorder prediction 699 720 - -
Cca09g01469 844 PANTHER POTASSIUM TRANSPORTER 10 843 - -
Cca09g01469 844 Pfam K+ potassium transporter 99 672 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca09g01469 844 MobiDBLite consensus disorder prediction 39 60 - -
Cca09g01469 844 MobiDBLite consensus disorder prediction 1 60 - -
Cca09g01469 844 TIGRFAM kup: potassium uptake protein 98 844 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca09g01469 844 MobiDBLite consensus disorder prediction 10 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01469 Cca-Chr9 38005774 38014144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01469 8 844 Inorganic Solute Cotransporters AT5G09400 78.741 0.0 1320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01469 - - gmx:100803841 1524.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01469 09 38005774 38014144 Cca08g02681 08 61243703 61249402 PCT