Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01462 ATGGATAGTCTTTGTTGCTTCAGTTCTGTCAGTCAGGTGGTTGGAGGGCGTTCTTCATGTAACTCTGGCAAAGGCAAGAGCAGCCAGTCCTCGGTCAAGTATGGCTATAGCCTGGTTAAAGGGAAAGCAAACCACCCGATGGAGGACTATCATGTAGCAAAGTTTGTCCAGTTCGAAGGGCGAGAGCTCGGGCTTTTTGCTATATATGATGGACACCTCGGAGACAGTGTACCGGCCTTTTTACAAAAGAATCTCTTTTCTAATATCTTGAAGGAAGAGGACTTCTGGAATGATCCATTCATGTCCATTTCTAATGCTTATGAGACAACAGATCGGGCAATTCTTTCTCACAGTCCTGATTTGGGGCGAGGAGGATCAACTGCAGTGACTGCAATTCTTATAAATAATCAGAACTTATGGGTAGCAAACGTGGGAGATTCACGAGCTGTTGTGTCAAGGGGAGGGGTGGCTGCACAGATGACAACTGATCATGAGCCCAATACTGAGCGGGGCAGTATTGAGAACAGAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTAGCAGTTTCTCGAGCCTTTGGAGACAAAAACCTTAAAACACACTTGCGATCTGATCCTGATATTCAGTATGCTGATATCACCCCAGATATTGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGGAAATCAAGAGGCTGTTGATATTGCAAGAAAAATAAAAGATCCACAAAAGGCAGCGAAACAACTAGCCACTGAGGCATTGAACAGAGACAGTAAGGATGACATTTCCTGCATTGTAGTTCGTTTCAAGGGTTGA 849 0.4488 MDSLCCFSSVSQVVGGRSSCNSGKGKSSQSSVKYGYSLVKGKANHPMEDYHVAKFVQFEGRELGLFAIYDGHLGDSVPAFLQKNLFSNILKEEDFWNDPFMSISNAYETTDRAILSHSPDLGRGGSTAVTAILINNQNLWVANVGDSRAVVSRGGVAAQMTTDHEPNTERGSIENRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQYADITPDIELLILASDGLWKVMGNQEAVDIARKIKDPQKAAKQLATEALNRDSKDDISCIVVRFKG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01462 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Cca09g01462 282 SUPERFAMILY PP2C-like 28 281 IPR036457 -
Cca09g01462 282 SMART PP2C_SIG_2 44 280 IPR001932 -
Cca09g01462 282 SMART PP2C_4 29 278 IPR001932 -
Cca09g01462 282 CDD PP2Cc 32 280 IPR001932 -
Cca09g01462 282 Gene3D - 17 282 IPR036457 -
Cca09g01462 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Cca09g01462 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Cca09g01462 282 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01462 Cca-Chr9 37929097 37936230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01462 1 281 PP2C-type Phosphatase Gene Family AT1G22280 70.035 7.71e-147 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01462 K17506 - gmx:100801722 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01462 09 37929097 37936230 Cca08g02678 08 61195433 61201351 PCT