Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01459 ATGATGATGAATTTCCTTCATCATCCACAAATTCATGAATGTAATGCCACTTACTATGAATCCCCCGATAATAGTAGTAGTCCTACTCCTATGATCATGCAGTCCAACATGGAGTTTGTTGCAACAATTGAGGAGGATGCCACCATCAAGTCCAAAGAAAGAGAGAAGGGCATGGTCCTGACATGGGAGGATTTGAAGGTCACAGTTCCAAATGGAAGGAATGGTAGGAAACCAATTCTTAAGGGTCTTACAGGTTATGCCAAGCCAGGGCAGCTCTTGGCAATAATGGGTCCTTCTGGCTGTGGCAAGTCCACACTTCTTGATGCTTTAGCAGGAAGGCTAGGTTCAAGCACAAAGCAAACAGGAAAAATTCTAATCAATGGTCACAGACATACACTGGCGTATGGAACATCTGCATATGTGACACATGATGATGCTATGTTGTCAACATTAACAGTTGGAGAAGCAGTGTACTACTCAGCTCATCTCCAATTTCCAGAGTCAATGTCCAACATAGAGAAGAAAGAGAGAACAGAGTTTACAATCAGACAAATGGGTCTACAAGATGCCACTGACACAAGGATTGAAGGGAAGGGTTCTAAAGGCCTTAGTGAGGGCCAAAAGAGGAGACTAGCCATTTGCATTGAGATTCTCACAAGCCCCAAACTTCTCCTTCTTGATGAACCAACTAGTGGCCTTGACAGTGCAGCTTCCTACTATGTCATGAGCAGAATTGCTAGCCTAAAGATTAGAGATGGCATCAAAAGGACAATTGTTGTGTCCATCCATCAGCCTAGTAGTGAAGTTTTTGAGCTTTTTGATAATCTTTGTCTTCTGTCTTCAGGTGAAACATTATATTTTGGCCCTACTTCTGCTGCAACTGAGTTCTTTGCTTCAAATGGCTTTCCTTGTCCACCTCGCCACAACCCTTCTGATCATTTCTTGAGGATCATAAACAAGGATTTTAAACAGGATGATGAAGGATACTTCCACATAGCAGTACACAAAGAAGAAGCAGTTGACATCCTTGTGAACTTCTATAAATCTTCTGAAATTAGTAACCAAGTTCAGAAAGAAGTAACAGCAATAGGTGAAAGTGAATATGGTTTCATGGGGAGGAACAGAGCACAAACTGCATTTCTTACTCAGTGCTACATTCTTATGAGAAGATCTTCGTTACACCTGTTTCGGGATGTAAGCAATTATTGGTTACGTCTAGCTATGTTTGTTGTAGCAGCTATTAGTCTGGGCACTATTTTCTTTGACGTTGGTTCAAGTCATGCATCTATCCAGGCTAGAGGGGCACTGGTCTCTTTTGTTGCCTCAGTTCTGACTTTTATAACCCTTCTTGGTGGATTCCCTCCTTTTGTGGAACAAATGAAGGTATTTCAACGTGAGAGATTGAATGGACATTACGGTGTCACTGCTTTTGTGATTAGCCACACTTTATCCCCAATTCCATACATGGTACTTATGTCACTGATTCCTGGAGTGATCACATATTACCTTTCTGGTCTTCACACAGGACTTGAACGTTGCCTATACTTTTCTTCTGTGTTACTTGCATGTATCTTGTGGGTTGAGAGCCTCATGATGGTTGTTTCAAGCATCTTTCCCAATCCCAACACCGGCATCACTGTCTCTGGTGGAATTATGGGAATCATGATTCTAACAGGTGGATTCTTTCGCTTGCCAAATGATCTTCCAAAACCATTTTGGAAATACCCTATGTACTATGTTTCCTTCCACAAATATGCCTTCCAAGGATTGTTCAAGAATGAGTTCATTGGTTTGAAGTTGGCTAGTGATCCAGATGGAGGTACCTACATAAGTGATAGAGAAATACTAACAAATATATGGCAAGTGGAAATGGGTCACTCCAAATGGGTTGATCTTGCTATCTTGATCGGAATAATTGTTTTATATAGGCTTGTGTTCTTGGCCATCattaagatcaaggagaagatgaagacttga 1977 0.4077 MMMNFLHHPQIHECNATYYESPDNSSSPTPMIMQSNMEFVATIEEDATIKSKEREKGMVLTWEDLKVTVPNGRNGRKPILKGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSSTKQTGKILINGHRHTLAYGTSAYVTHDDAMLSTLTVGEAVYYSAHLQFPESMSNIEKKERTEFTIRQMGLQDATDTRIEGKGSKGLSEGQKRRLAICIEILTSPKLLLLDEPTSGLDSAASYYVMSRIASLKIRDGIKRTIVVSIHQPSSEVFELFDNLCLLSSGETLYFGPTSAATEFFASNGFPCPPRHNPSDHFLRIINKDFKQDDEGYFHIAVHKEEAVDILVNFYKSSEISNQVQKEVTAIGESEYGFMGRNRAQTAFLTQCYILMRRSSLHLFRDVSNYWLRLAMFVVAAISLGTIFFDVGSSHASIQARGALVSFVASVLTFITLLGGFPPFVEQMKVFQRERLNGHYGVTAFVISHTLSPIPYMVLMSLIPGVITYYLSGLHTGLERCLYFSSVLLACILWVESLMMVVSSIFPNPNTGITVSGGIMGIMILTGGFFRLPNDLPKPFWKYPMYYVSFHKYAFQGLFKNEFIGLKLASDPDGGTYISDREILTNIWQVEMGHSKWVDLAILIGIIVLYRLVFLAIIKIKEKMKT 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01459 658 Pfam ABC-2 type transporter 382 595 IPR013525 GO:0016020|GO:0140359
Cca09g01459 658 Gene3D - 46 301 IPR027417 -
Cca09g01459 658 SMART AAA_5 89 283 IPR003593 -
Cca09g01459 658 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 3 658 - -
Cca09g01459 658 Pfam ABC-2 type transporter 263 327 IPR043926 GO:0140359
Cca09g01459 658 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 3 658 - -
Cca09g01459 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 297 IPR027417 -
Cca09g01459 658 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 60 306 IPR003439 GO:0005524
Cca09g01459 658 Pfam ABC transporter 80 231 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01459 Cca-Chr9 37893470 37898588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01459 77 267 Calmodulin-binding Proteins AT2G36910 30.392 3.35e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01459 K05681 - gmx:100784793 1149.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01459 09 37893470 37898588 Cca09g01459 09 37893470 37898588 ECH