Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01440 ATGGTTAAGGCTGACGGGTCTTTGCCTCGTCCACACCATGTGGCATGGCAATCACCTTCTTCGAATTACTTCAGCATGCTGCCTAAGCGCAGCTTAGTTTGTCTGCCAACATATCTGAATTCGAGTACTTGCATGTTTCCTGCTGTCAGTACATTTCGCGGGTTTGCAGCTCCTTCTATCCCAATTTTGAAGACTGAGCTAACAAATGAAGTGCAAGGATTCCTTCAGCATCACAATGCAGACACAAGTTTGAAAGAAACACATGTTGGAGGAGCTTTACAAAGGTTGTTCTATGGGCTTGAAGCTCCCTCTATCCCAAGTCTGAAGACTGAGCAAACAAATGAGGTGCAAGGATTCCTTAAGCATCACAATGCAGACACAAGTTTGAAAGAAACACATGTTGGAGGATCTTTTCAAAATGCAAATCCTTCATCTTTGCAGAAGAGGTTACTGATCTTTGACCGCTCTGATAATAAGACAAGGTTGTTTTATGGTCCTGTCCTCCCTCTTGTCCAGAGTCCAACTGTTGCTGCTACAAAGTTTGCTCAAAGTTATGTCGCAAATGGGGAGGGGCAGGCCAGTAATGTGGGTCAAAAGAATCTGCCCAGTTACAGTTTACCGGAAGTGTCTGTTAAGGATCATGCAGTCATTGAAGAAAGTGAAAATCACGAAGATACGGAAGAAATAAATGCATTGCTTTATTCtgatgatgacaatggcaacgatgatgatgatgattctgatgaGGTAACTAGTACAGATCGATCCCCTTTGGCAACTAAAATGACTCATGTGATACAAGAGCAGTTTGAAGACATGAAAGAGGATGTTGCTAGTTCTGATTGGCCTAACAAAAGGCTGAAGTTAATTGATGGTGACTACAATAGATCATCCCCACCTGTGCAAAGATCTAATTTGGCAAGACCAAATGGAACCTGTGATTGTGTCAGTGATGCTGAATCAAAGAATTCAAGTGGATGGCTATATTCTGTTGATAAAGCTAAAGTAGATGATTCAGTGGTTTGCGATATCAAATTGAAAAAGGATAAGATACGTGAATCTTTGAGAGTTCTTGAGAATTTAATTCCAGGTGCAAAAGGAAAGGAGCCACTGTTTGTCATTGATGGAACCATTGAGTACTTGAAATTTTTGATGTCCCAATCTGGTGCTCTTGGAGATAAATATCACTAA 1191 0.398 MVKADGSLPRPHHVAWQSPSSNYFSMLPKRSLVCLPTYLNSSTCMFPAVSTFRGFAAPSIPILKTELTNEVQGFLQHHNADTSLKETHVGGALQRLFYGLEAPSIPSLKTEQTNEVQGFLKHHNADTSLKETHVGGSFQNANPSSLQKRLLIFDRSDNKTRLFYGPVLPLVQSPTVAATKFAQSYVANGEGQASNVGQKNLPSYSLPEVSVKDHAVIEESENHEDTEEINALLYSDDDNGNDDDDDSDEVTSTDRSPLATKMTHVIQEQFEDMKEDVASSDWPNKRLKLIDGDYNRSSPPVQRSNLARPNGTCDCVSDAESKNSSGWLYSVDKAKVDDSVVCDIKLKKDKIRESLRVLENLIPGAKGKEPLFVIDGTIEYLKFLMSQSGALGDKYH 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01440 396 PANTHER TRANSCRIPTION FACTOR SAC51 94 395 - -
Cca09g01440 396 PANTHER TRANSCRIPTION FACTOR SAC51 8 79 - -
Cca09g01440 396 MobiDBLite consensus disorder prediction 233 259 - -
Cca09g01440 396 PANTHER TRANSCRIPTION FACTOR BHLH145 94 395 IPR037546 -
Cca09g01440 396 PANTHER TRANSCRIPTION FACTOR BHLH145 8 79 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01440 Cca-Chr9 37690571 37694640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01440 145 384 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 34.241 1.55e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01440 - - ccaj:109804859 764.222