Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01435 ATGGACGGCGGCGGCGGAAACCGAGAGGAGGCGGAGCGGTGGCTCTACACGGCCAACAAGCTCCTCAGCGCGCGCGACCTCCACGGCGCCCGCTCCTTCGCGATCCGCGCGCGCGAGTCGGACCCGACCTTCGAGGCCTCGGAGCACCTCCTGACGGTGATCGACACGCTCCTGGCCGGCGAGGCGCGGATCAACGACCACCACCGCGACTGGTATGGGATCCTCCAAATCCTCCGCTACAGCACCAACATGGACCATATCGGCGCCCAGTACCGGCGGCTGGCCCTCCTCCTTGACCCCCAACGCAACCTcttcgccttcgcctcccacgccttctccctcgTCCACGACGCCTGGTCCGTCCTCTCCAACCCCGCCAAGAAGGCCATGTACGACAGCGACCTCCGATTGCTCACCACCCCCACGCCGCCTCCCCCCGAACGAAACCCTAGATCCTCTCACAACTCCTCCGACTCCACTCGCCCCACTCCTCCCCCTCCCGACTCCACTCGTTCCGCCACCGTCGAAACCAGTTTCTGGACCTCCTGCCCTTACTGTTACGTTCTCTATGAGTACCCGAAAGTTTACGAGGAGTGCACCCTCAGGTGCCAGAGTTGCCGGAGGGGGTTCCATGCGGTGGTGATACGCTCGCCGCCGCCCTTGTCTGGGAAAGACGCTTCCTATTGTAGTTGGGGGTTTTTCCCTTTAGGGTTTTCTGGGAATTCCAAGGATGTGAACGGGTTTTCCTCCAATTGGAACCCCTTTTCCCCCTTGTTCCCTTGCCCCTTGAGAGGCTCGTCCGGTAGGAAGCCTCAGAGGAATTGGGATTACTACGACGACGAGGCTGCCGCCGCCTTCATCGAGTTGTCCGACCCGAGCGACGACGATTCCGGCGACGGCGACTGGAGGGGTGATAAGAGCGAGGGGAGGAAGAGGACTAGGCTGAAGAGAAAATCTGGCGATGGTAGGAGGGAAAATGCGGGGAGGCCTAGGAAGGGTGCTCATGCAGGGCATGAGAATGGAGCCTCTCGTGATGCTGCTATTAATGTAAATGCTAATTCTAATGCCAACGCTGCCTCTGGTGTTCCATCTGGTGCAAAGGCTGCATTGGGTGGTTCGAGGAGGAGGGGTGCGGGAAACTTGGGCAAGTTGGATTTGAATGTAGAGTTTAGCAATGAGGTGGAGGAGCCTTCCCGTGGAGTGCACGATCGGGAAGGGAATGCTGCTGGGCATGCTGAGGATAATATTGAAGGGATTGGGTTTTTTGAAGGACTTGATGAGTTTCTCAGTAGCTTGCCAATTCTCAATGTTGTGGCAGATGATAAGGTTAAGGGTCATTAG 1341 0.572 MDGGGGNREEAERWLYTANKLLSARDLHGARSFAIRARESDPTFEASEHLLTVIDTLLAGEARINDHHRDWYGILQILRYSTNMDHIGAQYRRLALLLDPQRNLFAFASHAFSLVHDAWSVLSNPAKKAMYDSDLRLLTTPTPPPPERNPRSSHNSSDSTRPTPPPPDSTRSATVETSFWTSCPYCYVLYEYPKVYEECTLRCQSCRRGFHAVVIRSPPPLSGKDASYCSWGFFPLGFSGNSKDVNGFSSNWNPFSPLFPCPLRGSSGRKPQRNWDYYDDEAAAAFIELSDPSDDDSGDGDWRGDKSEGRKRTRLKRKSGDGRRENAGRPRKGAHAGHENGASRDAAINVNANSNANAASGVPSGAKAALGGSRRRGAGNLGKLDLNVEFSNEVEEPSRGVHDREGNAAGHAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGH 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01435 446 CDD DnaJ 70 124 IPR001623 -
Cca09g01435 446 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 4 446 - -
Cca09g01435 446 SUPERFAMILY Chaperone J-domain 66 135 IPR036869 -
Cca09g01435 446 Pfam DnaJ domain 70 132 IPR001623 -
Cca09g01435 446 Gene3D DnaJ domain 64 139 IPR036869 -
Cca09g01435 446 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 446 - -
Cca09g01435 446 MobiDBLite consensus disorder prediction 289 343 - -
Cca09g01435 446 SMART dnaj_3 69 127 IPR001623 -
Cca09g01435 446 MobiDBLite consensus disorder prediction 136 173 - -
Cca09g01435 446 ProSiteProfiles dnaJ domain profile. 70 135 IPR001623 -
Cca09g01435 446 MobiDBLite consensus disorder prediction 319 339 - -
Cca09g01435 446 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
Cca09g01435 446 MobiDBLite consensus disorder prediction 355 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01435 Cca-Chr9 37620063 37621460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01435 10 445 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 45.336 4.72e-112 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01435 - - gmx:100811866 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01435 09 37620063 37621460 Cca08g02645 08 60917059 60919282 PCT