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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca09g01421
ATGGATACGGTGAACCATCACCGGGAAGACCCACCGCCGCTTCCCATGCACCTCGACACCTTCCATCACGCCAACGCTTCCGACGAAGGGGAACAACCTGCTCCACTCGCCATTGCTTCTTCTGCTCCGCACGCCCGCACCAGTGAACTCACCATTTCCTTCGAAGGCGAGGTCTATGTTTTCCCAGCTGTTACGCCCGATAAGGTCCAGGCTGTATTATTACTCTTGGGGGGGCAGGAGATGCAAAATAACGGCCCTGCTTCTGACATTTTGTTGCAGCAAAACTGTCAGGACATTAGGGGAATAAATGATCCCTCCCGAAACTCGAAGCTTTCACGAAGATTTGCATCACTTGTTAGGTTTCGTGAAAAACGAAAAGAGAGATGTTTCGAGAAAAAAATCCGGTATTCTTGCCGTAAAGAGGTTGCCCAGAGGATGCATCGAAAGAATGGACAGTTTGCGTCATTAAAGGAAGACTACAAATCTCCTACTGAAAACTGGGATTCAAGCAATGGTACTCCTTGCCCAGAATCTATTGAACGTAGATGCCAGCATTGTGGAATTAGTGAGAAGTCTACTCCAGCTATGCGTCGAGGACCAGCAGGTCCAAGATCTCTGTGCAATGCCTGTGGGCTTATGTGGGCAAATAAGGGAACTCTGAGAGATCTCAGCAAAGCAGGAAGGGTTGCTTTTGAACAAAATGAACTGGATACTTCAGCTGATATAAAGCCTTCAACAACAGAAGCAGAACATTCTTGTGCTAACCCGGACAAGGAGGGAAGTCCTGAGGAAACTAAGCCTGTACAAATGGATTCCAGACAGTCACCTGAGAAGACAAATGGGCAGGTTTTATCTATTTATTTGTTTGTTTGTGTAAGCTATGATGAGGAAATTTGTCTTGATTATGCAATTTACTATCGTTGA
924
0.4632
MDTVNHHREDPPPLPMHLDTFHHANASDEGEQPAPLAIASSAPHARTSELTISFEGEVYVFPAVTPDKVQAVLLLLGGQEMQNNGPASDILLQQNCQDIRGINDPSRNSKLSRRFASLVRFREKRKERCFEKKIRYSCRKEVAQRMHRKNGQFASLKEDYKSPTENWDSSNGTPCPESIERRCQHCGISEKSTPAMRRGPAGPRSLCNACGLMWANKGTLRDLSKAGRVAFEQNELDTSADIKPSTTEAEHSCANPDKEGSPEETKPVQMDSRQSPEKTNGQVLSIYLFVCVSYDEEICLDYAIYYR
307
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca09g01421
307
SUPERFAMILY
Glucocorticoid receptor-like (DNA-binding domain)
179
230
-
-
Cca09g01421
307
ProSitePatterns
GATA-type zinc finger domain.
183
210
IPR000679
GO:0006355|GO:0043565
Cca09g01421
307
ProSiteProfiles
GATA-type zinc finger domain profile.
177
234
IPR000679
GO:0006355|GO:0043565
Cca09g01421
307
MobiDBLite
consensus disorder prediction
1
20
-
-
Cca09g01421
307
ProSiteProfiles
Tify domain profile.
43
78
IPR010399
-
Cca09g01421
307
MobiDBLite
consensus disorder prediction
237
277
-
-
Cca09g01421
307
CDD
ZnF_GATA
182
225
IPR000679
GO:0006355|GO:0043565
Cca09g01421
307
Pfam
tify domain
46
77
IPR010399
-
Cca09g01421
307
ProSiteProfiles
CCT domain profile.
114
156
IPR010402
GO:0005515
Cca09g01421
307
Gene3D
-
177
235
IPR013088
GO:0006355|GO:0008270
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca09g01421
Cca-Chr9
37477733
37481533
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca09g01421
49
226
Tify Gene Family
AT1G51600
57.527
8.37e-61
194
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
C2C2-GATA
Cca09g01421
CCT
5.3e-14
CL0281
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca09g01421
-
-
gmx:102669848
476.478
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