Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01404 atggaggtcagGGCCATCGAGGTCCTCGTGGAACTCGCCTCGCTCCAGACCTCGTTTCTCACGCTCGACGAGGCCATCAAGACCACCAATCGCAGGGTTAACGCGCTCGAGAACGTGGTGAAGCCGCGCCTCGAGAATACCATTAGTTACATCAAGGGCGAATTGGATGAGTTGGAGAGGGAGGATTTCTTCAGGCTCAAGAAGATTCAGGGCTATAAGAagagggagattcagaagcagatgcagttgcagttgcagttgcagatgcGGTCCTCCTCCGATGCGCCTTTGAACAAAGGGGTTTCTTTCGATTCTTCTCGCAATTTGTTGGCTGTGGCGGACAAAGACGACGATATTATTTTCTGA 366 0.4372 MEVRAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIQKQMQLQLQLQMRSSSDAPLNKGVSFDSSRNLLAVADKDDDIIF 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01404 121 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 3 121 IPR002699 GO:0046961
Cca09g01404 121 TIGRFAM V_ATPase_subD: V-type ATPase, D subunit 4 74 IPR002699 GO:0046961
Cca09g01404 121 Coils Coil 41 61 - -
Cca09g01404 121 Pfam ATP synthase subunit D 4 70 IPR002699 GO:0046961
Cca09g01404 121 Gene3D - 3 82 - -
Cca09g01404 121 PANTHER V-TYPE PROTON ATPASE SUBUNIT D-RELATED 3 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01404 Cca-Chr9 37342483 37343184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01404 3 121 Primary Pumps ATPases(2) AT3G58730 70.248 3.34e-53 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01404 K02149 - gmx:100801612 176.022